RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DTWD1Q8N5C7 304 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 ADCY4Q8NFM4 1077 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 OR8K5Q8NH50 307 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 ZFP28Q8NHY6 868 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 ZFP90Q8TF47 636 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CANT1Q8WVQ1 401 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 NRG4Q8WWG1 115 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 FIG4Q92562 907 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 FAM162AQ96A26 154 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 AURKBQ96GD4 344 aaPredicted RBP13.09□□□□□ -0.31
TPM1-215ENST00000558868 SERINC2Q96SA4 455 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CD180Q99467 661 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CCDC3Q9BQI4 270 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 UGT2B28Q9BY64 529 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 KLHL4Q9C0H6 718 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 AICDAQ9GZX7 198 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 RAB33BQ9H082 229 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CAAP1Q9H8G2 361 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 PRDM9Q9NQV7 894 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 C1GALT1Q9NS00 363 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 GIMAP4Q9NUV9 329 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 PSME2Q9UL46 239 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 ASB4Q9Y574 426 aa13.09□□□□□ -0.31
TPM1-215ENST00000558868 CROCCQ5TZA2 2017 aa13.08□□□□□ -0.31
TPM1-215ENST00000558868 A0A0G2JN53 185 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 TCRBV5S2A0A599 114 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 H0YGG7 62 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 B3GALT2O43825 422 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 B3GALT4O96024 378 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 RETP07949 1114 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 ZNF888P0CJ79 500 aaPredicted RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 SMIM10L1P0DMW3 83 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 NTSP30990 170 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 CHI3L1P36222 383 aaPredicted RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 FRKP42685 505 aaPredicted RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 MANFP55145 182 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 RAB8AP61006 207 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 ARF3P61204 181 aaPredicted RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 HBA1P69905 142 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 VAC14Q08AM6 782 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 FADDQ13158 208 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 FAM98BQ52LJ0 330 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 WLSQ5T9L3 541 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 ZCCHC8Q6NZY4 707 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 RABEPKQ7Z6M1 372 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 ZNF761Q86XN6 746 aaPredicted RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 ADGRG5Q8IZF4 528 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 EID3Q8N140 333 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 CARFQ8N187 725 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 ARL10Q8N8L6 244 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 C19orf47Q8N9M1 422 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 PAPD5Q8NDF8 572 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 OR52N2Q8NGI0 321 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 UTP15Q8TED0 518 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 NCLNQ969V3 563 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 CIDECQ96AQ7 238 aaPredicted RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 SLCO4A1Q96BD0 722 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 PPWD1Q96BP3 646 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 ZDHHC12Q96GR4 267 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 TCTN2Q96GX1 697 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 SMIM10Q96HG1 83 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 ELF4Q99607 663 aaPredicted RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 MACROD1Q9BQ69 325 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 SLC35A5Q9BS91 424 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 VCXQ9H320 206 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 MS4A12Q9NXJ0 267 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 EPHA6Q9UF33 1036 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 RIMS3Q9UJD0 308 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 FBXO4Q9UKT5 387 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 AURKCQ9UQB9 309 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 SPACA6W5XKT8 324 aa13.08□□□□□ -0.32
TPM1-215ENST00000558868 TDRD6O60522 2096 aaKnown RBP13.08□□□□□ -0.32
TPM1-215ENST00000558868 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 M0R296 226 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 YKT6O15498 198 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 NUDT21O43809 227 aaKnown RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 SDC3O75056 442 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 CREG1O75629 220 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 STATHP02808 62 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 PVRP15151 417 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 IL1RNP18510 177 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 EFNA1P20827 205 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 FASP25445 335 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 CERS1P27544 350 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 TLX1P31314 330 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 CNR2P34972 360 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 SOAT1P35610 550 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 BUD31P41223 144 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 MAGEA8P43361 318 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 LSSP48449 732 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 PPM1FP49593 454 aaPredicted RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 PCBP4P57723 403 aaKnown RBP13.07□□□□□ -0.32
TPM1-215ENST00000558868 SKP1P63208 163 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 CHRNB3Q05901 458 aa13.07□□□□□ -0.32
TPM1-215ENST00000558868 RBBP4Q09028 425 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1563.1 ms