RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ASB3Q9Y575 518 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 BCAS2O75934 225 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 DIRAS1O95057 198 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SMPD1P17405 629 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 SCNN1AP37088 669 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 CLCNKAP51800 687 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 RPS24P62847 133 aaKnown RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 RELAQ04206 551 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 TLE2Q04725 743 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 C3orf33Q6P1S2 294 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 MTFR2Q6P444 385 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 C12orf40Q86WS4 652 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 NAXEQ8NCW5 288 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 OR4C15Q8NGM1 316 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 FANK1Q8TC84 345 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 PHOSPHO1Q8TCT1 267 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF230Q9UIE0 474 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-208ENST00000538570 HCN4Q9Y3Q4 1203 aa9.61□□□□□ -0.87
COL4A6-208ENST00000538570 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 FCER2P06734 321 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 EBLN1P0CF75 366 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 G6PDP11413 515 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 PPP1R8Q12972 351 aaKnown RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SOWAHAQ2M3V2 549 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 PLEKHN1Q494U1 663 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CYBRD1Q53TN4 286 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SYPL2Q5VXT5 272 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SCGB1C1Q8TD33 95 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SCRN2Q96FV2 425 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CMKLR1Q99788 373 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 BORCS7-ASMTA0A0B4J1R7 106 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SLC35F4A4IF30 521 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 IL3P08700 152 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 GKN3PP0CG01 181 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 DGKEP52429 567 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 MEDAGQ5VYS4 303 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 MBLAC2Q68D91 279 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF367Q7RTV3 350 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 GPAT4Q86UL3 456 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 OR6N1Q8NGY5 312 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 DEDD2Q8WXF8 326 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 C14orf119Q9NWQ9 140 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 IGLV3-22A0A075B6J6 115 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CAPN5O15484 640 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 MTX2O75431 263 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CLEC3AO75596 197 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 AHSA1O95433 338 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 RBMXP38159 391 aaKnown RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 FXYD6P3P58550 94 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 NFATC2Q13469 925 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 ADGRF1Q5T601 910 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 UBE2UQ5VVX9 321 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 GID4Q8IVV7 300 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 METTL25Q8N6Q8 603 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 ZUFSPQ96AP4 578 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 NECAB3Q96P71 396 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 MS4A12Q9NXJ0 267 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 IFT52Q9Y366 437 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 C6orf47O95873 294 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 OAS1P00973 400 aaKnown RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 IL1R2P27930 398 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF41P51814 821 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 RPS13P62277 151 aaKnown RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 EMX2Q04743 252 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 TRAM2Q15035 370 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 TRAM1Q15629 374 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 TIGD5Q53EQ6 642 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CCBE1Q6UXH8 406 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF767PQ75MW2 155 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 PHTF2Q8N3S3 785 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SLC5A11Q8WWX8 675 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 TMEM74Q96NL1 305 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 GPR88Q9GZN0 384 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 METTL7AQ9H8H3 244 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CERS4Q9HA82 394 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CRTAC1Q9NQ79 661 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 AHSGP02765 367 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 S100PP25815 95 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 HNF1BP35680 557 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 ATP4BP51164 291 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SNRPD2P62316 118 aaKnown RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 CMASQ8NFW8 434 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-208ENST00000538570 KCTD13Q8WZ19 329 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 GPR22Q99680 433 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF226Q9NYT6 803 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
COL4A6-208ENST00000538570 SMIM30A4D0T7 59 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 PRKACGP22612 351 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 KCNJ5P48544 419 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 NRIP1P48552 1158 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TAGLNQ01995 201 aaKnown RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 GHRHRQ02643 423 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 ZNF674Q2M3X9 581 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 GLT8D1Q68CQ7 371 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 DCDC5Q6ZRR9 648 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 MMAAQ8IVH4 418 aaKnown RBP9.59□□□□□ -0.87
COL4A6-208ENST00000538570 TCEANCQ8N8B7 351 aa9.59□□□□□ -0.87
COL4A6-208ENST00000538570 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms