RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 OR5T3Q8NGG3 340 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 OR51Q1Q8NH59 317 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 CPT1CQ8TCG5 803 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 STT3BQ8TCJ2 826 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 SELENOMQ8WWX9 145 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 SERPINI1Q99574 410 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 SLC25A23Q9BV35 468 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 NPLQ9BXD5 320 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-222ENST00000520948 ZNF717Q9BY31 904 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-222ENST00000520948 SHCBP1LQ9BZQ2 653 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 C20orf27Q9GZN8 174 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 ACBD3Q9H3P7 528 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 ELOVL6Q9H5J4 265 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 MKKSQ9NPJ1 570 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-222ENST00000520948 NKIRAS1Q9NYS0 192 aa17.12■□□□□ 0.33
VEGFA-222ENST00000520948 GPN3Q9UHW5 284 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-222ENST00000520948 USP9XQ93008 2570 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-222ENST00000520948 A0A0G2JN53 185 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 PLPP1O14494 284 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 CHST10O43529 356 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 ITM2AO43736 263 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 SH3BGRLO75368 114 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 AGFG2O95081 481 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 BMP10O95393 424 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 ZGLP1P0C6A0 271 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 UROSP10746 265 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 HSD3B1P14060 373 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 GRK2P25098 689 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 HSD3B2P26439 372 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 BSGP35613 385 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 TSFMP43897 325 aaKnown RBP17.11■□□□□ 0.33
VEGFA-222ENST00000520948 CCL11P51671 97 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 SKP1P63208 163 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 TGM3Q08188 693 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 ABRAXAS2Q15018 415 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 SGO1Q5FBB7 561 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 FAM69BQ5VUD6 431 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 OR4C11Q6IEV9 310 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 ZNF793Q6ZN11 406 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 RNF165Q6ZSG1 346 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 OR2Y1Q8NGV0 311 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 THAP4Q8WY91 577 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 RGMAQ96B86 450 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 FAR2Q96K12 515 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 KCNC2Q96PR1 638 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 SERINC2Q96SA4 455 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 EML4Q9HC35 981 aaKnown RBP17.11■□□□□ 0.33
VEGFA-222ENST00000520948 TRPC4Q9UBN4 977 aa17.11■□□□□ 0.33
VEGFA-222ENST00000520948 ZNF860A6NHJ4 632 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 TMEM114B3SHH9 223 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 SAP18O00422 153 aaKnown RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 RTCAO00442 366 aaKnown RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 SEMA3DO95025 777 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 UMODP07911 640 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 BGNP21810 368 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 ATP5A1P25705 553 aaKnown RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 SERPINB3P29508 390 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 MTTPP55157 894 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 FOXL2P58012 376 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 OCA2Q04671 838 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 CSTF3Q12996 717 aaKnown RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 SSPNQ14714 243 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 KANK2Q63ZY3 851 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 TRIM46Q7Z4K8 759 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 LAPTM4BQ86VI4 370 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 ZC3H7AQ8IWR0 971 aaKnown RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 HOMEZQ8IX15 550 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 CLYBLQ8N0X4 340 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 CA13Q8N1Q1 262 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 MGARPQ8TDB4 240 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 ADAMTS17Q8TE56 1095 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 PAIP2Q9BPZ3 127 aaKnown RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 ROGDIQ9GZN7 287 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 ING2Q9H160 280 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 KCMF1Q9P0J7 381 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 LUZP4Q9P127 313 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 HCN3Q9P1Z3 774 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 ZDHHC2Q9UIJ5 367 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 NXT1Q9UKK6 140 aaKnown RBP17.1■□□□□ 0.33
VEGFA-222ENST00000520948 MED13Q9UHV7 2174 aa17.1■□□□□ 0.33
VEGFA-222ENST00000520948 NBPF19A0A087WUL8 3843 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 A0A088AWK7 358 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 AZIN1O14977 448 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 ATXN8OSP0DMR3 200 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 CHN1P15882 459 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 ZNF10P21506 573 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 IL10P22301 178 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 HIST1H1TP22492 207 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 EFNA3P52797 238 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 ABCE1P61221 599 aaKnown RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 PPP2R2AP63151 447 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 OLR1P78380 273 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 KLC1Q07866 573 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 TBL3Q12788 808 aaKnown RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 AP5B1Q2VPB7 878 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 FHL5Q5TD97 284 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 CLEC6AQ6EIG7 209 aa17.09■□□□□ 0.33
VEGFA-222ENST00000520948 MRM1Q6IN84 353 aaKnown RBP17.09■□□□□ 0.33
VEGFA-222ENST00000520948 METTL4Q8N3J2 472 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms