RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 DEFB118Q96PH6 123 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 KCNN3Q9UGI6 736 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 DLGAP4Q9Y2H0 992 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 GPR52Q9Y2T5 361 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 CCKBRP32239 447 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 OR4D1Q15615 310 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 TECRLQ5HYJ1 363 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 FCRLBQ6BAA4 426 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 ZSCAN1Q8NBB4 408 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 OR5T1Q8NG75 326 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 OR6N2Q8NGY6 317 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 MAL2Q969L2 176 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 SRRDQ9UH36 339 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 ACSL6Q9UKU0 697 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 ROBO1Q9Y6N7 1651 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 ZNF726A6NNF4 738 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 B4DGG1 531 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 MMP20O60882 483 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 B4GALT2O60909 372 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 PRSS56P0CW18 603 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 NKAPLQ5M9Q1 402 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 ARSKQ6UWY0 536 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 CFAP77Q6ZQR2 320 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 MFSD8Q8NHS3 518 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 ACOT12Q8WYK0 555 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 ORAI3Q9BRQ5 295 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 TBL1XR1Q9BZK7 514 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 CARS2Q9HA77 564 aaKnown RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 NLE1Q9NVX2 485 aaPredicted RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 FAM120CQ9NX05 1096 aaKnown RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 DUXAA6NLW8 204 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 NPIPA5E9PKD4 350 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SYN3O14994 580 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 KAT7O95251 611 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 CSTBP04080 98 aaKnown RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 SELPP16109 830 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 EPCAMP16422 314 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 CCNOP22674 350 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 COL28A1Q2UY09 1125 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SHQ1Q6PI26 577 aaKnown RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 IQCF1Q8N6M8 205 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 NLGN2Q8NFZ4 835 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 OSTF1Q92882 214 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 OSBPL2Q9H1P3 480 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 NPIPA1Q9UND3 350 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 STUB1Q9UNE7 303 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 A0A1W2PPL8 197 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 TNFSF12O43508 249 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 UBXN7O94888 489 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 MAS1P04201 325 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 MSL3P1P0C860 447 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 DRD5P21918 477 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 MYF6P23409 242 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 TM4SF1P30408 202 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 GRIA2P42262 883 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 GALNT2Q10471 571 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 RFTN1Q14699 578 aaPredicted RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 CCDC116Q8IYX3 515 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 PHOSPHO1Q8TCT1 267 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SH3YL1Q96HL8 342 aaPredicted RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 MGLLQ99685 303 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SPATA9Q9BWV2 254 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SLC29A3Q9BZD2 475 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 KNDC1Q76NI1 1749 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 F8A1P23610 371 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 CDNFQ49AH0 187 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 C17orf62Q9BQA9 187 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SLC5A7Q9GZV3 580 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 BTBD1Q9H0C5 482 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 NUFIP1Q9UHK0 495 aaKnown RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 ATXN7L1Q9ULK2 861 aaPredicted RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 MGAT4BQ9UQ53 548 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 FMO6PO60774 539 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SPARCP09486 303 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SLC35E2BP0CK96 405 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 LSSP48449 732 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 PITX1P78337 314 aaPredicted RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 FAM189BP81408 668 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SP3Q02447 781 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 HS3ST5Q8IZT8 346 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 TBC1D15Q8TC07 691 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 SH3RF2Q8TEC5 729 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 TLE6Q9H808 572 aa11.6□□□□□ -0.55
UBR4-205ENST00000417040 RABL2AQ9UBK7 228 aaPredicted RBP11.6□□□□□ -0.55
UBR4-205ENST00000417040 PRSS51A0A1B0GVH4 220 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 LCHNA4D1U4 455 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 EEF1E1-BLOC1S5C9J1V9 151 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 LCKP06239 509 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
UBR4-205ENST00000417040 PRKACAP17612 351 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 PRKACBP22694 351 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 GSTM2P28161 218 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 HOXD12P35452 270 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 NTRK2Q16620 822 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 AGTRAPQ6RW13 159 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 TP53INP2Q8IXH6 220 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 SLC5A11Q8WWX8 675 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 PIP5K1AQ99755 562 aa11.59□□□□□ -0.55
UBR4-205ENST00000417040 WDR77Q9BQA1 342 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms