RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IMP3Q9NV31 184 aaKnown RBP14.49□□□□□ -0.09
SCAMP4-202ENST00000409472 THUMPD1Q9NXG2 353 aaKnown RBP14.49□□□□□ -0.09
SCAMP4-202ENST00000409472 USP34Q70CQ2 3546 aa14.49□□□□□ -0.09
SCAMP4-202ENST00000409472 KRBA1A5PL33 1030 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 SLC1A7O00341 560 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 FOXD2O60548 495 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 APODP05090 189 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 SLC35G4P0C7Q5 338 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 KIR2DL1P43626 348 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 DLX2Q07687 328 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 RPA4Q13156 261 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 COL9A2Q14055 689 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 KDM4DQ6B0I6 523 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 CCDC71Q8IV32 467 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 C11orf65Q8NCR3 313 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 PIK3C3Q8NEB9 887 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 JPH3Q8WXH2 748 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 UBE2FQ969M7 185 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 CXorf40BQ96DE9 158 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 CLIP3Q96DZ5 547 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 C12orf66Q96MD2 445 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 MS4A8Q9BY19 250 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 AICDAQ9GZX7 198 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 LCMT2O60294 686 aaKnown RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 NOL3O60936 208 aaKnown RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 CD247P20963 164 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 FMO3P31513 532 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 CYP2A13Q16696 494 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 KHDRBS2Q5VWX1 349 aaKnown RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 Q6ZPB1 254 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 ZBTB46Q86UZ6 589 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 FAM124AQ86V42 546 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 MINDY2Q8NBR6 621 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 SETD7Q8WTS6 366 aaKnown RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 HDAC2Q92769 488 aaKnown RBP14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 LHPPQ9H008 270 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 SYNPO2LQ9H987 977 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 TESMINQ9Y4I5 508 aa14.48□□□□□ -0.09
SCAMP4-202ENST00000409472 WASHC1A8K0Z3 465 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 TNFRSF10AO00220 468 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 SLC16A6O15403 523 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 SUV39H1O43463 412 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 ALOX5P09917 674 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 FPR1P21462 350 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 RRM2P31350 389 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 DNAJA1P31689 397 aaKnown RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 PTGER1P34995 402 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 BSGP35613 385 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 ALDH9A1P49189 494 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 IL5RAQ01344 420 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 FOXD4Q12950 439 aaPredicted RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 SCARB2Q14108 478 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 CLCA4Q14CN2 919 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 SMN1Q16637 294 aaKnown RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 ITPRIPL2Q3MIP1 535 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 WASH2PQ6VEQ5 465 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 SPARTQ8N0X7 666 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 BPIFB6Q8NFQ5 453 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 SPPL2AQ8TCT8 520 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 GANCQ8TET4 914 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 DOK1Q99704 481 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 PSD2Q9BQI7 771 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 TRIT1Q9H3H1 467 aaKnown RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 MIEF1Q9NQG6 463 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 C1GALT1Q9NS00 363 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 DZANK1Q9NVP4 752 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 TEX10Q9NXF1 929 aaPredicted RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 TAS2R9Q9NYW1 312 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 SNX8Q9Y5X2 465 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 A0A1W2PPW3 197 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 A0A1W2PQU0 124 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 A0A1W2PRB8 838 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 C4orf51C9J302 202 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 PTGES3LE9PB15 166 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 J3KTA2 159 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 KMOO15229 486 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 TMPRSS11DO60235 418 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 MAN1A2O60476 641 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 PRKRAO75569 313 aaKnown RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 ITGAMP11215 1152 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 COL9A1P20849 921 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 PTX3P26022 381 aaPredicted RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 DCKP27707 260 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 IGFALSP35858 605 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 CHI3L1P36222 383 aaPredicted RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 TRIM23P36406 574 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 BMXP51813 675 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 EEF1A2Q05639 463 aaKnown RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 EPS8Q12929 822 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 GCNT6Q5T4J0 391 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 BROXQ5VW32 411 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 ANKRD54Q6NXT1 300 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 UBE3DQ7Z6J8 389 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 KRT78Q8N1N4 520 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 OR52N2Q8NGI0 321 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 OR13F1Q8NGS4 319 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 FERD3LQ96RJ6 166 aa14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 RSPO3Q9BXY4 272 aaPredicted RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 YTHDF1Q9BYJ9 559 aaKnown RBP14.47□□□□□ -0.09
SCAMP4-202ENST00000409472 REEP1Q9H902 201 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms