RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 GFM1Q96RP9 751 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 SERINC2Q96SA4 455 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 NPAS2Q99743 824 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ZMYND15Q9H091 742 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 REEP4Q9H6H4 257 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 EFCAB1Q9HAE3 211 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 STARD5Q9NSY2 213 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 MAP10Q9P2G4 905 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ASB4Q9Y574 426 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 CEP250Q9BV73 2442 aa13.99□□□□□ -0.17
SHKBP1-211ENST00000595945 ARHGAP10A1A4S6 786 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 CCDC154A6NI56 674 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 GABRR3A8MPY1 467 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 MRASO14807 208 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 AIM2O14862 343 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 MAP3K7O43318 606 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 FOXD2O60548 495 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 GALR3O60755 368 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 SCN2BO60939 215 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 MED26O95402 600 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 FURINP09958 794 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 FAM58BPP0C7Q3 252 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 PIM1P11309 404 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 FOLR1P15328 257 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 RPL3P39023 403 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 MTTPP55157 894 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 WNT3P56703 355 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 C2orf80Q0P641 193 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 SLAMF1Q13291 335 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 KCNAB1Q14722 419 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 SLC9A5Q14940 896 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 GPR19Q15760 415 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 AASDHQ4L235 1098 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 TIGD2Q4W5G0 525 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 TMTC4Q5T4D3 741 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 GARNL3Q5VVW2 1013 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 C8orf82Q6P1X6 216 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 PIP4P1Q86T03 277 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 DPP10Q8N608 796 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 OR7A2PQ8NGA2 310 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 OR8J2Q8NGG1 315 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 GFM2Q969S9 779 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 CCDC74BQ96LY2 380 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 BTBD10Q9BSF8 475 aa13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 SPRTNQ9H040 489 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 LYARQ9NX58 379 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 LEF1Q9UJU2 399 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-211ENST00000595945 A8MU76 341 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 ANGPT2O15123 496 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 DNAJC8O75937 253 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 PGRP06401 933 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 LAMP1P11279 417 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 DRD2P14416 443 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 S100A3P33764 101 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 ARL4DP49703 201 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 HNRNPFP52597 415 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 SLC25A3Q00325 362 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 MC1RQ01726 317 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 ZFP36L1Q07352 338 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 TRA2AQ13595 282 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 PRSS53Q2L4Q9 553 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF385BQ569K4 471 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 PAGE3Q5JUK9 113 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 PRSS41Q7RTY9 318 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 R3HCC1LQ7Z5L2 792 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 PDSS2Q86YH6 399 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 MMP21Q8N119 569 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 TMEM132CQ8N3T6 1108 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 OR1L3Q8NH93 324 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 CDC26Q8NHZ8 85 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 ROPN1LQ96C74 230 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF501Q96CX3 271 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 CDC6Q99741 560 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 COPS7BQ9H9Q2 264 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 TEX10Q9NXF1 929 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 SIDT1Q9NXL6 827 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 KCMF1Q9P0J7 381 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 MAN2B2Q9Y2E5 1009 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 MYO15AQ9UKN7 3530 aa13.97□□□□□ -0.17
SHKBP1-211ENST00000595945 A0A088AWK7 358 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 A0A1W2PR48 441 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 HYKKA2RU49 373 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 TMEM150CB9EJG8 249 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 FXYD1O00168 92 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 FOXS1O43638 330 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 B3GALT2O43825 422 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 COX7A2P14406 83 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 IL1RNP18510 177 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 DDCP20711 480 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 ZNF10P21506 573 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 KIR3DL1P43629 444 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 NUDT2P50583 147 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 PDX1P52945 283 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 ACTN3Q08043 901 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 ILKQ13418 452 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 RUNX2Q13950 521 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 FAM53BQ14153 422 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 GRM7Q14831 915 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 NDUFA9Q16795 377 aa13.96□□□□□ -0.17
SHKBP1-211ENST00000595945 MMEL1Q495T6 779 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms