RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-216	ENST00000592444	PITPNM3	Q9BZ71	974 aa		4.56	□□□□□ -1.68
ERCC1-216	ENST00000592444	DHX35	Q9H5Z1	703 aa	Known RBP	4.56	□□□□□ -1.68
ERCC1-216	ENST00000592444	ASB8	Q9H765	288 aa		4.56	□□□□□ -1.68
ERCC1-216	ENST00000592444	KCNK13	Q9HB14	408 aa		4.56	□□□□□ -1.68
ERCC1-216	ENST00000592444	OR12D3	Q9UGF7	316 aa		4.56	□□□□□ -1.68
ERCC1-216	ENST00000592444	PSMD13	Q9UNM6	376 aa		4.56	□□□□□ -1.68
ERCC1-216	ENST00000592444	CFAP20	Q9Y6A4	193 aa	Known RBP	4.56	□□□□□ -1.68
ERCC1-216	ENST00000592444	SNRNP200	O75643	2136 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TCRBV7S3A2	A0A539	114 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	C5orf60	A6NFR6	353 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	DSCR3	O14972	297 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	KMO	O15229	486 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	FGF10	O15520	208 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	RAMP2	O60895	175 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	PPP1R3D	O95685	299 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	MMP2	P08253	660 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	SOD3	P08294	240 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	FAM153B	P0C7A2	387 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	RBP3	P10745	1247 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	CYP2A6	P11509	494 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	ETS1	P14921	441 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	SLC25A16	P16260	332 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	HLA-DPA1	P20036	260 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TPSB2	P20231	275 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	USF1	P22415	310 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	PSMA3	P25788	255 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	GJC1	P36383	396 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	CPA2	P48052	419 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	NR2C2	P49116	596 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	MAPKAPK2	P49137	400 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	ARSF	P54793	590 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	ADAR	P55265	1226 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	PPIA	P62937	165 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	SRSF4	Q08170	494 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TFDP2	Q14188	446 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TPSAB1	Q15661	275 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	HADH	Q16836	314 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	FAM153C	Q494X1	144 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TEX35	Q5T0J7	233 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	CCDC137	Q6PK04	289 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	CLEC2A	Q6UVW9	174 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	NXPE4	Q6UWF7	544 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	PLXDC2	Q6UX71	529 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	LCNL1	Q6ZST4	164 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TMC3	Q7Z5M5	1100 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	UBE3D	Q7Z6J8	389 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	LRRTM4	Q86VH4	590 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	GSPT2	Q8IYD1	628 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	PGBD5	Q8N414	524 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	C19orf47	Q8N9M1	422 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	MNS1	Q8NEH6	495 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	FBXO25	Q8TCJ0	367 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	CAVIN3	Q969G5	261 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TBC1D31	Q96DN5	1066 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	NAP1L3	Q99457	506 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	ZFYVE21	Q9BQ24	234 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TIMM29	Q9BSF4	260 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	MCMBP	Q9BTE3	642 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	PARD6B	Q9BYG5	372 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	FAM129A	Q9BZQ8	928 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	SLITRK2	Q9H156	845 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	C10orf88	Q9H8K7	445 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	ZDHHC11	Q9H8X9	412 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	BARX1	Q9HBU1	254 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	IMP3	Q9NV31	184 aa	Known RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	FAM153A	Q9UHL3	310 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	SLC24A2	Q9UI40	661 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	SHOC2	Q9UQ13	582 aa		4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
ERCC1-216	ENST00000592444	LOC102723996	A0A087X1L8	192 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	IGHV3-20	A0A0C4DH32	117 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444		A0A1B0GVC2	190 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	PABPN1L	A6NDY0	278 aa	Known RBP	4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	CCT8L1P	A6NM43	557 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	FADS2P1	A8MWK0	482 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	HACD1	B0YJ81	288 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444		M0QZ24	198 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	EEF2K	O00418	725 aa	Known RBP	4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	BTN3A3	O00478	584 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	AQP7	O14520	342 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	DYNC1I1	O14576	645 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	DNALI1	O14645	258 aa	Predicted RBP	4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	APOL1	O14791	398 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	PPP1R12A	O14974	1030 aa	Predicted RBP	4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	DAPK3	O43293	454 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	PRAMEF11	O60813	436 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	SEC24D	O94855	1032 aa	Predicted RBP	4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	TJP3	O95049	919 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	METTL18	O95568	372 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	ESR1	P03372	595 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	ZSCAN5DP	P0CG00	497 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	CTPS1	P17812	591 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	CTSS	P25774	331 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	PTPN3	P26045	913 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	RBL1	P28749	1068 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	GCH1	P30793	250 aa		4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	RPL22	P35268	128 aa	Known RBP	4.54	□□□□□ -1.68
ERCC1-216	ENST00000592444	ADRA1A	P35348	466 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms