RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 HAVCR2Q8TDQ0 301 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CORO2AQ92828 525 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CPNE4Q96A23 557 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 AP1S3Q96PC3 154 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF700Q9H0M5 742 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 MTG2Q9H4K7 406 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF408Q9H9D4 720 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CDHR5Q9HBB8 845 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GAR1Q9NY12 217 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 COL20A1Q9P218 1284 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR55Q9Y2T6 319 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR31O00270 319 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PPP1R2P9O14990 202 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PEX10O60683 326 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 UBCP0CG48 685 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 S100GP29377 79 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 SFRP4Q6FHJ7 346 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 DOK6Q6PKX4 331 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CDHR3Q6ZTQ4 885 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 RNF180Q86T96 592 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 TAC4Q86UU9 113 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 RETREG3Q86VR2 466 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 KLBQ86Z14 1044 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 EIF5A2Q9GZV4 153 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 TCEAL2Q9H3H9 227 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 USP21Q9UK80 565 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 INTS6Q9UL03 887 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PRKRAO75569 313 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GJB3O75712 270 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 SERPIND1P05546 499 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 MMP7P09237 267 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 AHCYP23526 432 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 MNDAP41218 407 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CDK6Q00534 326 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 SPIBQ01892 262 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 OR5I1Q13606 314 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 SOWAHCQ53LP3 525 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 SERPINA12Q8IW75 414 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GLB1L2Q8IW92 636 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM102Q8N9M5 508 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 AIF1LQ9BQI0 150 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 SUV39H2Q9H5I1 410 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GTPBP1O00178 669 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PRH1P02810 166 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 H2AFB2P0C5Z0 115 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PRF1P14222 555 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 YWHAQP27348 245 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PPP2R1BP30154 601 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 BDKRB2P30411 391 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 BMI1P35226 326 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GGT5P36269 586 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 IRF8Q02556 426 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 RNF219Q5W0B1 726 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 NADSYN1Q6IA69 706 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GDPD4Q6W3E5 623 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GALNTL5Q7Z4T8 443 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 NLGN4YQ8NFZ3 816 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 SCMH1Q96GD3 660 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 MRI1Q9BV20 369 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CRTAC1Q9NQ79 661 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 OR2S2Q9NQN1 319 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GRHPRQ9UBQ7 328 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 MAGI1Q96QZ7 1491 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 LMTK2Q8IWU2 1503 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PALLDQ8WX93 1383 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 MROH6A6NGR9 719 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 AIPO00170 330 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 TPST2O60704 377 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 F10P00742 488 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CD86P42081 329 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 RFX3P48380 749 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 EVX2Q03828 476 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 TRIM61Q5EBN2 209 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 ANGEL2Q5VTE6 544 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 KIAA1614Q5VZ46 1190 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 TRIM40Q6P9F5 258 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 IL27RAQ6UWB1 636 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 PGAP1Q75T13 922 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 ABHD13Q7L211 337 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 TRIB2Q92519 343 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM84BQ96KN1 310 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CSF3RQ99062 836 aa8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 GBA2Q9HCG7 927 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 CFAP20Q9Y6A4 193 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-203ENST00000553612 NEMP2A6NFY4 417 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 C3orf70A6NLC5 250 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF487B1APH4 448 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 MCIDASD6RGH6 385 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 I6L893 689 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 PDHXO00330 501 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 TFEBP19484 476 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 OC90Q02509 493 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CD47Q08722 323 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 GRM4Q14833 912 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC39A12Q504Y0 691 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CLLU1Q5K131 121 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM109BQ6ICB4 259 aaPredicted RBP8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 SYT13Q7L8C5 426 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 CATSPERDQ86XM0 798 aa8.68□□□□□ -1.02
GTF2A1-203ENST00000553612 POGLUT1Q8NBL1 392 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms