RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CCDC30Q5VVM6 783 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 NAA16Q6N069 864 aaPredicted RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 C2orf66Q6UXQ4 117 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 APOBEC3FQ8IUX4 373 aaKnown RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 CEND1Q8N111 149 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 TTC30BQ8N4P2 665 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 ZNRF1Q8ND25 227 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF540Q8NDQ6 660 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 APPL2Q8NEU8 664 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 VN1R17PQ8TDU5 208 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 SEPT1Q8WYJ6 367 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 PTERQ96BW5 349 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 FAM120BQ96EK7 910 aaKnown RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 MPP4Q96JB8 637 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 SERINC2Q96SA4 455 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 TREX2Q9BQ50 279 aaPredicted RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 TEX12Q9BXU0 123 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 MRPL1Q9BYD6 325 aaKnown RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 AMBNQ9NP70 447 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 KLRF1Q9NZS2 232 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 DBF4Q9UBU7 674 aaPredicted RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 SATB2Q9UPW6 733 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 NEU3Q9UQ49 428 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 CFAP65Q6ZU64 1925 aaKnown RBP1.44□□□□□ -2.18
CCDC93-209ENST00000488908 IGKV2D-24A0A075B6R9 120 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 PRSS46E5RG02 174 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 GPAA1O43292 621 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 MT-ND2P03891 347 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 ATP5BP06576 529 aaKnown RBP1.44□□□□□ -2.18
CCDC93-209ENST00000488908 MYL6BP14649 208 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 P2RY4P51582 365 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 CLNS1AP54105 237 aaKnown RBP1.44□□□□□ -2.18
CCDC93-209ENST00000488908 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 MC1RQ01726 317 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 CNPY1Q3B7I2 92 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 DUSP28Q4G0W2 176 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF691Q5VV52 312 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 FUT10Q6P4F1 479 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 C4orf50Q6ZRC1 276 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 DET1Q7L5Y6 550 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 MAATS1Q7Z4T9 603 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 GPR137CQ8N3F9 429 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 C14orf178Q8N769 122 aaPredicted RBP1.44□□□□□ -2.18
CCDC93-209ENST00000488908 TEX19Q8NA77 164 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 PYCR2Q96C36 320 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF830Q96NB3 372 aaPredicted RBP1.44□□□□□ -2.18
CCDC93-209ENST00000488908 CUEDC2Q9H467 287 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 SH3GLB2Q9NR46 395 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 HAO2Q9NYQ3 351 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF282Q9UDV7 671 aaPredicted RBP1.44□□□□□ -2.18
CCDC93-209ENST00000488908 KLHL21Q9UJP4 597 aa1.44□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF215Q9UL58 517 aaPredicted RBP1.44□□□□□ -2.18
CCDC93-209ENST00000488908 H3BMM5 538 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 CLDN4O14493 209 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 MCF2LO15068 1137 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 AP5Z1O43299 807 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 EMC8O43402 210 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF44P15621 663 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 RPA1P27694 616 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 TRPC1P48995 793 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 CREB5Q02930 508 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 EPS8Q12929 822 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 CHAF1BQ13112 559 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 BAATQ14032 418 aaPredicted RBP1.43□□□□□ -2.18
CCDC93-209ENST00000488908 PTPRCAPQ14761 206 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 NTRK2Q16620 822 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 PTGISQ16647 500 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 LRRC37A5PQ49AS3 106 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 RFTN2Q52LD8 501 aaPredicted RBP1.43□□□□□ -2.18
CCDC93-209ENST00000488908 TCEAL6Q6IPX3 200 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 FAM180BQ6P0A1 224 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 SZRD1Q7Z422 152 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 PIGWQ7Z7B1 504 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 PRUNE1Q86TP1 453 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 SAMD12Q8N8I0 201 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 SNRNP27Q8WVK2 155 aaKnown RBP1.43□□□□□ -2.18
CCDC93-209ENST00000488908 LIPHQ8WWY8 451 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 HDAC11Q96DB2 347 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 OTUB1Q96FW1 271 aaPredicted RBP1.43□□□□□ -2.18
CCDC93-209ENST00000488908 C16orf74Q96GX8 76 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 MUS81Q96NY9 551 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 NAP1L4Q99733 375 aaKnown RBP1.43□□□□□ -2.18
CCDC93-209ENST00000488908 IKZF5Q9H5V7 419 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 PIH1D3Q9NQM4 214 aaKnown RBP1.43□□□□□ -2.18
CCDC93-209ENST00000488908 GIMAP4Q9NUV9 329 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 TBC1D7Q9P0N9 293 aa1.43□□□□□ -2.18
CCDC93-209ENST00000488908 ARID4BQ4LE39 1312 aaPredicted RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 A6NCN8 305 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 AGAP14A8MT82 685 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 IGHG3P01860 377 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 STAG3L1P0CL83 205 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 DLATP10515 647 aaKnown RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 CYP11B2P19099 503 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 EEF1B2P24534 225 aaKnown RBP1.42□□□□□ -2.18
CCDC93-209ENST00000488908 PCGF2P35227 344 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 HSD17B3P37058 310 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 C16orf72Q14CZ0 275 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 PPP1R3AQ16821 1122 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 C6orf163Q5TEZ5 329 aa1.42□□□□□ -2.18
CCDC93-209ENST00000488908 GCNT7Q6ZNI0 430 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms