RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 FBXO48Q5FWF7 155 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 TRIM40Q6P9F5 258 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 Q6ZPB1 254 aaPredicted RBP19.65■□□□□ 0.74
VSX1-206ENST00000444511 SCUBE1Q8IWY4 988 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 ARMC10Q8N2F6 343 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 CPSF7Q8N684 471 aaKnown RBP19.65■□□□□ 0.74
VSX1-206ENST00000444511 APCDD1LQ8NCL9 501 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 OR2L5Q8NG80 312 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 ADAMTS18Q8TE60 1221 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 CPNE1Q99829 537 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 ERP44Q9BS26 406 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 REXO4Q9GZR2 422 aaKnown RBP19.65■□□□□ 0.74
VSX1-206ENST00000444511 EHD1Q9H4M9 534 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 WHRNQ9P202 907 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 FBXW2Q9UKT8 454 aa19.65■□□□□ 0.74
VSX1-206ENST00000444511 MYO7BQ6PIF6 2116 aa19.64■□□□□ 0.74
VSX1-206ENST00000444511 EIF3HO15372 352 aaKnown RBP eCLIP19.64■□□□□ 0.73
VSX1-206ENST00000444511 STK16O75716 305 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 GGT5P36269 586 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 HSPA7P48741 367 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 ADORA2A-AS1P86434 159 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 ZNF630Q2M218 657 aaPredicted RBP19.64■□□□□ 0.73
VSX1-206ENST00000444511 XKR6Q5GH73 641 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 CDKL4Q5MAI5 379 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 SULT1C3Q6IMI6 304 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 MAATS1Q7Z4T9 603 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 ZNF227Q86WZ6 799 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 TMEM156Q8N614 296 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 FAM47BQ8NA70 645 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 VMP1Q96GC9 406 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 GPR22Q99680 433 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 RBBP8Q99708 897 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 CCDC77Q9BR77 488 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 COPS7BQ9H9Q2 264 aaPredicted RBP19.64■□□□□ 0.73
VSX1-206ENST00000444511 CD274Q9NZQ7 290 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 PYCARDQ9ULZ3 195 aa19.64■□□□□ 0.73
VSX1-206ENST00000444511 KLF13Q9Y2Y9 288 aaPredicted RBP19.64■□□□□ 0.73
VSX1-206ENST00000444511 TCRBV9S1A1TA0A576 114 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 S100BP04271 92 aaPredicted RBP19.63■□□□□ 0.73
VSX1-206ENST00000444511 CD1DP15813 335 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 GP5P40197 560 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 HSF1Q00613 529 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 OR4D1Q15615 310 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 PDK4Q16654 411 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 ADPRMQ3LIE5 342 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 RNFT1Q5M7Z0 435 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 ZNF595Q8IYB9 648 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 POGLUT1Q8NBL1 392 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 ESAMQ96AP7 390 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 PTCD3Q96EY7 689 aaKnown RBP19.63■□□□□ 0.73
VSX1-206ENST00000444511 QRFPRQ96P65 431 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 SERINC2Q96SA4 455 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 EFCAB11Q9BUY7 163 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 PRM3Q9NNZ6 103 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 MEMO1Q9Y316 297 aa19.63■□□□□ 0.73
VSX1-206ENST00000444511 FANCGO15287 622 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 ITGA10O75578 1167 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 AGAP20933 346 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 CERS1P27544 350 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 PPP2R1BP30154 601 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 MEOX1P50221 254 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 HNRNPFP52597 415 aaKnown RBP19.62■□□□□ 0.73
VSX1-206ENST00000444511 MTTPP55157 894 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 TGM3Q08188 693 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 DOC2AQ14183 400 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 RCN2Q14257 317 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 HIST2H2ACQ16777 129 aaPredicted RBP19.62■□□□□ 0.73
VSX1-206ENST00000444511 HIST2H2AA3Q6FI13 130 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 ADNP2Q6IQ32 1131 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 ABHD17CQ6PCB6 329 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 C3orf62Q6ZUJ4 267 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 VN1R5Q7Z5H4 357 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 CTAGE3PQ8IX95 158 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 CYP4Z2PQ8N1L4 340 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 TMEM52Q8NDY8 209 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 SPATA4Q8NEY3 305 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 EXT2Q93063 718 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 NCLNQ969V3 563 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 ADAP2Q9NPF8 381 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 RNF112Q9ULX5 631 aa19.62■□□□□ 0.73
VSX1-206ENST00000444511 PPIEQ9UNP9 301 aaKnown RBP19.62■□□□□ 0.73
VSX1-206ENST00000444511 SYNDIG1LA6NDD5 238 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 FAM159BA6NKW6 160 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 KLRC4-KLRK1H3BQV0 150 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 TGFBR3LH3BV60 316 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 TFECO14948 347 aaPredicted RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 ZNHIT1O43257 154 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 RAD51CO43502 376 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 CCNT2O60583 730 aaKnown RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 PRAMEF4O60810 478 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 TBX6O95947 436 aaPredicted RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 COX6B1P14854 86 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 SPRP35270 261 aaPredicted RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 LIM2P55344 173 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 RAB10P61026 200 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 LAPTM5Q13571 262 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 ZKSCAN8Q15776 578 aaPredicted RBP19.61■□□□□ 0.73
VSX1-206ENST00000444511 PAGE2BQ5JRK9 111 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 PRAMEF9Q5VWM5 478 aa19.61■□□□□ 0.73
VSX1-206ENST00000444511 CYS1Q717R9 158 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms