RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 METTL2AQ96IZ6 378 aaKnown RBP12.89□□□□□ -0.35
SNU13-204ENST00000402458 C7orf26Q96N11 449 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 SLC26A1Q9H2B4 701 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 WDR54Q9H977 334 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 AKIRIN1Q9H9L7 192 aaPredicted RBP12.89□□□□□ -0.35
SNU13-204ENST00000402458 LYRM4Q9HD34 91 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 C14orf105Q9NVL8 296 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 PNPOQ9NVS9 261 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 LYARQ9NX58 379 aaKnown RBP12.89□□□□□ -0.35
SNU13-204ENST00000402458 PHF11Q9UIL8 331 aa12.89□□□□□ -0.35
SNU13-204ENST00000402458 MRPS33Q9Y291 106 aaKnown RBP12.89□□□□□ -0.35
SNU13-204ENST00000402458 TRPC5OSA6NMA1 111 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 GUCY1B2O75343 617 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 VPS4BO75351 444 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 SEC22BO75396 215 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 SCELO95171 688 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 KLK1P06870 262 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 ZGLP1P0C6A0 271 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 JAK1P23458 1154 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 PTPN4P29074 926 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 TLX1P31314 330 aaPredicted RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 BSGP35613 385 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 EIF2S3P41091 472 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 FOLR3P41439 243 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 XCR1P46094 333 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 SNRPNP63162 240 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 OLR1P78380 273 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 TBL3Q12788 808 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 SYT16Q17RD7 645 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 CCNYL2Q5T2Q4 361 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 MFSD4BQ5TF39 518 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 FAM219BQ5XKK7 198 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 ZNF793Q6ZN11 406 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 RGS9BPQ6ZS82 235 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 COX15Q7KZN9 410 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 WDR75Q8IWA0 830 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 CA13Q8N1Q1 262 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 ZCCHC7Q8N3Z6 543 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 C1orf52Q8N6N3 182 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 PIWIL2Q8TC59 973 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 CHTF18Q8WVB6 975 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 TBC1D20Q96BZ9 403 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 PPP3R2Q96LZ3 170 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 OR1F2PQ96R84 312 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 SORBS1Q9BX66 1292 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 TUBB1Q9H4B7 451 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 DDX31Q9H8H2 851 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 LRTM1Q9HBL6 345 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 SLC22A11Q9NSA0 550 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 C1orf109Q9NX04 203 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 CTSFQ9UBX1 484 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 MARCOQ9UEW3 520 aaPredicted RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 PTRH2Q9Y3E5 179 aaKnown RBP12.88□□□□□ -0.35
SNU13-204ENST00000402458 FREM2Q5SZK8 3169 aa12.88□□□□□ -0.35
SNU13-204ENST00000402458 GNG14A0A1W2PPG7 69 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 TCP11X1B4DZS4 312 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 HDAC3O15379 428 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 PCDH7O60245 1069 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 EEDO75530 441 aaKnown RBP12.87□□□□□ -0.35
SNU13-204ENST00000402458 FAM58BPP0C7Q3 252 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 LIFP15018 202 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 CPN2P22792 545 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 PRPH2P23942 346 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 MDH1P40925 334 aaKnown RBP12.87□□□□□ -0.35
SNU13-204ENST00000402458 BUD31P41223 144 aaPredicted RBP12.87□□□□□ -0.35
SNU13-204ENST00000402458 MAPK12P53778 367 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 LIM2P55344 173 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 RAB38P57729 211 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 MC1RQ01726 317 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 GUCY1A3Q02108 690 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 RUNX2Q13950 521 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 NKG7Q16617 165 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 ATP6AP1LQ52LC2 224 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 MRPL14Q6P1L8 145 aaKnown RBP12.87□□□□□ -0.35
SNU13-204ENST00000402458 VASH2Q86V25 355 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 GPR180Q86V85 440 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 ZSCAN1Q8NBB4 408 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 STT3BQ8TCJ2 826 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 TUBGCP3Q96CW5 907 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 APIPQ96GX9 242 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 CCNL2Q96S94 520 aaPredicted RBP12.87□□□□□ -0.35
SNU13-204ENST00000402458 ACTL8Q9H568 366 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 SOX17Q9H6I2 414 aaPredicted RBP12.87□□□□□ -0.35
SNU13-204ENST00000402458 WDR41Q9HAD4 459 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 SLCO1B3Q9NPD5 702 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 MCM8Q9UJA3 840 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 FBXW2Q9UKT8 454 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 TCFL5Q9UL49 500 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 DAPP1Q9UN19 280 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 TMED5Q9Y3A6 229 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 PCDHGA6Q9Y5G7 932 aa12.87□□□□□ -0.35
SNU13-204ENST00000402458 PTGDR2Q9Y5Y4 395 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms