RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 FAM131AQ6UXB0 335 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 PIWIL3Q7Z3Z3 882 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 FAM20CQ8IXL6 584 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SLC5A8Q8N695 610 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SIPA1Q96FS4 1042 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 KCNK12Q9HB15 430 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 MS4A12Q9NXJ0 267 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF860A6NHJ4 632 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 GNB5O14775 395 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 KAT7O95251 611 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SRPRAP08240 638 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 STSP08842 583 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 PRG2P13727 222 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF12P17014 697 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 PCSK6P29122 969 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 COPZ1P61923 177 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 IL18R1Q13478 541 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TUBA3CQ13748 450 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 LARS2Q15031 903 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 GPR68Q15743 365 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CACTIN-AS1Q8N1I8 211 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 TCEANCQ8N8B7 351 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 MRPL43Q8N983 215 aaKnown RBP8.12□□□□□ -1.11
PTPRK-206ENST00000368215 CAPSLQ8WWF8 208 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 MACROD1Q9BQ69 325 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 SLC2A11Q9BYW1 496 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF385DQ9H6B1 395 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 GORASP2Q9H8Y8 452 aa8.12□□□□□ -1.11
PTPRK-206ENST00000368215 GMFGO60234 142 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ATE1O95260 518 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MPIP34949 423 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 TMBIM6P55061 237 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 NCS1P62166 190 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MLLT1Q03111 559 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 DNASE1L3Q13609 305 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 RPS26P11Q5JNZ5 115 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 KLHL35Q6PF15 583 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 DLEU7Q6UYE1 221 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CADM2Q8N3J6 435 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 OR9Q2Q8NGE9 314 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 UCK2Q9BZX2 261 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MAGIXQ9H6Y5 334 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 TBC1D17Q9HA65 648 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 DYRK3O43781 588 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MPZL2O60487 215 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ALPLP05186 524 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CDK4P11802 303 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CKMT1AP12532 417 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 TPP2P29144 1249 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 HSD17B2P37059 387 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SMN1Q16637 294 aaKnown RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 KIAA1161Q6NSJ0 714 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SHQ1Q6PI26 577 aaKnown RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF740Q8NDX6 193 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 HMGCLL1Q8TB92 370 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 FCGR1BQ92637 280 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 TBX5Q99593 518 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 OSBPL10Q9BXB5 764 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SERHL2Q9H4I8 314 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 NEUROD4Q9HD90 331 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 LTB4R2Q9NPC1 389 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SERHLQ9NQF3 203 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 HSFX1Q9UBD0 423 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF225Q9UK10 706 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CLEC4AQ9UMR7 237 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 RNF6Q9Y252 685 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ALPPP05187 535 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 LCKP06239 509 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MATN1P21941 496 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MLLT10P55197 1068 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF155Q12901 538 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF234Q14588 700 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ZNF311Q5JNZ3 666 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SNAP47Q5SQN1 464 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ANKRD34AQ69YU3 496 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 C6orf120Q7Z4R8 191 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 GPR149Q86SP6 731 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 LAPTM4BQ86VI4 370 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 PIGXQ8TBF5 258 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SMARCD2Q92925 531 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 DIRAS2Q96HU8 199 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 POLE4Q9NR33 117 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MALT1Q9UDY8 824 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 SPIN1Q9Y657 262 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 GRXCR2A6NFK2 248 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CPSF4LA6NMK7 179 aaKnown RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 TSC22D2O75157 780 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 HNRNPA1P09651 372 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CCDC159P0C7I6 412 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 PIM1P11309 404 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-206ENST00000368215 UQCRC2P22695 453 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 PIK3CBP42338 1070 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 ITGA1P56199 1179 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 MVKQ03426 396 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 STX4Q12846 297 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CLCA4Q14CN2 919 aa8.11□□□□□ -1.11
PTPRK-206ENST00000368215 CRTC2Q53ET0 693 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms