RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 NOBOXO60393 691 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 EPN2O95208 641 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 CFIP05156 583 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 GPX2P18283 190 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 EFNA1P20827 205 aaPredicted RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 CHN2P52757 468 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 LPAL2Q16609 132 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 OR52E8Q6IFG1 317 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 FAM71E1Q6IPT2 247 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 ENPP6Q6UWR7 440 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 SLC25A45Q8N413 288 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 MS4A8Q9BY19 250 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 UGT2B28Q9BY64 529 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 PITHD1Q9GZP4 211 aaPredicted RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 FSCN3Q9NQT6 498 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 SPHK1Q9NYA1 384 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 OAZ3Q9UMX2 235 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 PCDHB11Q9Y5F2 797 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 GMEB1Q9Y692 573 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 H7BY64 318 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 SEMA3DO95025 777 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 KLK1P06870 262 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 CHRM5P08912 532 aaPredicted RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 FURINP09958 794 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 PEBP1P30086 187 aaKnown RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 SERPINB1P30740 379 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 MAZP56270 477 aaKnown RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 CHRNB3Q05901 458 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 NKG7Q16617 165 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 TMTC4Q5T4D3 741 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 RABEPKQ7Z6M1 372 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 CHERPQ8IWX8 916 aaKnown RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 RBM12BQ8IXT5 1001 aaKnown RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 ADGRF3Q8IZF5 1079 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 VPS37AQ8NEZ2 397 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 CEP76Q8TAP6 659 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 FBXO30Q8TB52 745 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 PRAP1Q96NZ9 151 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 DCAF13Q9NV06 445 aaKnown RBP21.56■■□□□ 1.04
CDX1-201ENST00000231656 PCDHGB4Q9UN71 923 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 PCDHGB5Q9Y5G0 923 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 CSNK1G3Q9Y6M4 447 aa21.56■■□□□ 1.04
CDX1-201ENST00000231656 C1orf226A1L170 272 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 ANKDD1BA6NHY2 528 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 PATE3B3GLJ2 98 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 PDLIM1O00151 329 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 BTN3A3O00478 584 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 RNASET2O00584 256 aaKnown RBP21.55■■□□□ 1.04
CDX1-201ENST00000231656 LRRC74AQ0VAA2 488 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 DEPDC1Q5TB30 811 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 OGFOD3Q6PK18 319 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 TMEM26Q6ZUK4 368 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 C17orf82Q86X59 251 aaPredicted RBP21.55■■□□□ 1.04
CDX1-201ENST00000231656 ARL14Q8N4G2 192 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 NETO1Q8TDF5 533 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 CNBD2Q96M20 576 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 ZNF717Q9BY31 904 aaPredicted RBP21.55■■□□□ 1.04
CDX1-201ENST00000231656 CAPN10Q9HC96 672 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 C8orf4Q9NR00 106 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 OLAHQ9NV23 265 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 SH3BP4Q9P0V3 963 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 ZNF639Q9UID6 485 aa21.55■■□□□ 1.04
CDX1-201ENST00000231656 DLGAP1O14490 977 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 CLOCKO15516 846 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 PRSS23O95084 383 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 RASAL1O95294 804 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 RPL3P39023 403 aaKnown RBP21.54■■□□□ 1.04
CDX1-201ENST00000231656 FASLGP48023 281 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 TAS2R50P59544 299 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 CSNK1G2P78368 415 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 MC1RQ01726 317 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 PRDX1Q06830 199 aaKnown RBP21.54■■□□□ 1.04
CDX1-201ENST00000231656 C2orf80Q0P641 193 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 HLA-BQ31612 363 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 NHSL2Q5HYW2 709 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.54■■□□□ 1.04
CDX1-201ENST00000231656 KHDRBS2Q5VWX1 349 aaKnown RBP21.54■■□□□ 1.04
CDX1-201ENST00000231656 R3HCC1LQ7Z5L2 792 aaKnown RBP21.54■■□□□ 1.04
CDX1-201ENST00000231656 ZZZ3Q8IYH5 903 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 NCLNQ969V3 563 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 SORBS1Q9BX66 1292 aaKnown RBP21.54■■□□□ 1.04
CDX1-201ENST00000231656 TWSG1Q9GZX9 223 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 NTN4Q9HB63 628 aa21.54■■□□□ 1.04
CDX1-201ENST00000231656 IGKV1-8A0A0C4DH67 115 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 FEZF1A0PJY2 475 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 PLPP1O14494 284 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 PPM1DO15297 605 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 KCNK5O95279 499 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 IL1RNP18510 177 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 TPP2P29144 1249 aaPredicted RBP21.53■■□□□ 1.04
CDX1-201ENST00000231656 CYP4F2P78329 520 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 GK3PQ14409 553 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 CPZQ66K79 652 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 IKBIPQ70UQ0 350 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 ZNF761Q86XN6 746 aaPredicted RBP21.53■■□□□ 1.04
CDX1-201ENST00000231656 AVL9Q8NBF6 648 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 MTERF3Q96E29 417 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 TPT1P8Q9HAU6 139 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 AHSPQ9NZD4 102 aa21.53■■□□□ 1.04
CDX1-201ENST00000231656 PDP2Q9P2J9 529 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms