RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 TUBA3CQ13748 450 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 CTTNQ14247 550 aaKnown RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 CCDC6Q16204 474 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 DECR1Q16698 335 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 DCAF4L1Q3SXM0 396 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 C6orf10Q5SRN2 563 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 DCST1Q5T197 706 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 PRAMEF17Q5VTA0 474 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 FRG2Q64ET8 278 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 TCEAL6Q6IPX3 200 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 TUBA3EQ6PEY2 450 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 ALKAL1Q6UXT8 129 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 ZNF813Q6ZN06 617 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 PRSS42Q7Z5A4 293 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 DSELQ8IZU8 1212 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 EMC1Q8N766 993 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 AMER3Q8N944 861 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 CLEC1AQ8NC01 280 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 PAPD5Q8NDF8 572 aaKnown RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 RND1Q92730 232 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 TCEAL3Q969E4 200 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 DTD2Q96FN9 168 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 VPS39Q96JC1 886 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 SFXN2Q96NB2 322 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 ZNF582Q96NG8 517 aaPredicted RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 SEMA3CQ99985 751 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 WDR77Q9BQA1 342 aaPredicted RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 BDH2Q9BUT1 245 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 POLDIP3Q9BY77 421 aaKnown RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 POLR3FQ9H1D9 316 aaPredicted RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 MMRN2Q9H8L6 949 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 Q9N2K0 584 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 DNAJC4Q9NNZ3 241 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 RAB9BQ9NP90 201 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 CNGB3Q9NQW8 809 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 TMEM51Q9NW97 253 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 ASB6Q9NWX5 421 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 SLCO1C1Q9NYB5 712 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 CDC14AQ9UNH5 594 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 GPR132Q9UNW8 380 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 STRAPQ9Y3F4 350 aaKnown RBP4.39□□□□□ -1.71
CDRT1-208ENST00000630868 NEUROG3Q9Y4Z2 214 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 RAI2Q9Y5P3 530 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 ZNF462Q96JM2 2506 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 PTPRQQ9UMZ3 2332 aa4.39□□□□□ -1.71
CDRT1-208ENST00000630868 MYO18AQ92614 2054 aaKnown RBP4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SMIM28A0A1B0GU29 152 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 PRSS51A0A1B0GVH4 220 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 C13orf42A0A1B0GVH6 325 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 LRRIQ4A6NIV6 560 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 C4orf47A7E2U8 309 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 I3L4J1 428 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 CDX4O14627 284 aaPredicted RBP4.38□□□□□ -1.71
CDRT1-208ENST00000630868 TRDMT1O14717 391 aaKnown RBP4.38□□□□□ -1.71
CDRT1-208ENST00000630868 TIMM23O14925 209 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 LDB2O43679 373 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 DEXIO95424 95 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 VNN2O95498 520 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 KCNE1P15382 129 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 CHRNB2P17787 502 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 UGT1A1P22309 533 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SLC6A6P31641 620 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 MAGEB1P43366 347 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 BRCC3P46736 316 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 RGS7P49802 495 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 MAPK12P53778 367 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 TAS2R38P59533 333 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 FOXM1Q08050 763 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 PON2Q15165 354 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 TEAD2Q15562 447 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 MAPK6Q16659 721 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 ZNF284Q2VY69 593 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 PAPD7Q5XG87 772 aaKnown RBP4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SLC36A4Q6YBV0 504 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SHFQ7M4L6 423 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 TMPRSS11BQ86T26 416 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 PATL1Q86TB9 770 aaKnown RBP4.38□□□□□ -1.71
CDRT1-208ENST00000630868 PM20D2Q8IYS1 436 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 APCDD1Q8J025 514 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 ELMOD1Q8N336 334 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 FBXW8Q8N3Y1 598 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SYN2Q92777 582 aaPredicted RBP4.38□□□□□ -1.71
CDRT1-208ENST00000630868 TAAR8Q969N4 342 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 CHFRQ96EP1 664 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 STAMBPL1Q96FJ0 436 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 EPSTI1Q96J88 318 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 FAM81BQ96LP2 452 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SAMD8Q96LT4 415 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 ZNF560Q96MR9 790 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 KCNK16Q96T55 309 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 TIMP4Q99727 224 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 PKP2Q99959 881 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 EDEM2Q9BV94 578 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 ZCCHC4Q9H5U6 513 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SLA2Q9H6Q3 261 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 GOLGA2P5Q9HBQ8 144 aa4.38□□□□□ -1.71
CDRT1-208ENST00000630868 SLC38A7Q9NVC3 462 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms