RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 PTGS2P35354 604 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 RPL21P46778 160 aaKnown RBP10.73□□□□□ -0.69
RAB5C-203ENST00000546881 AP1S2P56377 157 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 TOR1AIP1Q5JTV8 583 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 QSOX2Q6ZRP7 698 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 FGD2Q7Z6J4 655 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 TMPRSS11BQ86T26 416 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 CDH24Q86UP0 819 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 ZNF227Q86WZ6 799 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 SULF2Q8IWU5 870 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 CHERPQ8IWX8 916 aaKnown RBP10.73□□□□□ -0.69
RAB5C-203ENST00000546881 TMEM156Q8N614 296 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 CEP112Q8N8E3 955 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 OR4K1Q8NGD4 311 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 OR56A3Q8NH54 315 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 UTP15Q8TED0 518 aaKnown RBP10.73□□□□□ -0.69
RAB5C-203ENST00000546881 PHF10Q8WUB8 498 aaKnown RBP10.73□□□□□ -0.69
RAB5C-203ENST00000546881 ATL1Q8WXF7 558 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 NEIL2Q969S2 332 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 FBXL8Q96CD0 374 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 CFAP36Q96G28 342 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 SPOCK3Q9BQ16 436 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 ERP44Q9BS26 406 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 NECTIN3Q9NQS3 549 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 KLF13Q9Y2Y9 288 aaPredicted RBP10.73□□□□□ -0.69
RAB5C-203ENST00000546881 ASB1Q9Y576 335 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 PCNX1Q96RV3 2341 aa10.73□□□□□ -0.69
RAB5C-203ENST00000546881 KLRC4-KLRK1H3BQV0 150 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 ADAM10O14672 748 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 PEX1O43933 1283 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 PDE9AO76083 593 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 MYO1DO94832 1006 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 SAT1P21673 171 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 SCTRP47872 440 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 GPR85P60893 370 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 SLC7A5Q01650 507 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 SPANXN3Q5MJ09 141 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 HP1BP3Q5SSJ5 553 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-203ENST00000546881 HECTD2Q5U5R9 776 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 ZNF572Q7Z3I7 529 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-203ENST00000546881 THOC6Q86W42 341 aaKnown RBP10.72□□□□□ -0.69
RAB5C-203ENST00000546881 CYP4Z2PQ8N1L4 340 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 POGLUT1Q8NBL1 392 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 FAM57AQ8TBR7 257 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 SREK1Q8WXA9 508 aaKnown RBP10.72□□□□□ -0.69
RAB5C-203ENST00000546881 CCT6BQ92526 530 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 C14orf79Q96F83 325 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 CERS2Q96G23 380 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 DMRTA2Q96SC8 542 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 AIF1LQ9BQI0 150 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 SARGQ9BW04 601 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 KLHL31Q9H511 634 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 PNO1Q9NRX1 252 aaKnown RBP10.72□□□□□ -0.69
RAB5C-203ENST00000546881 ZFATQ9P243 1243 aa10.72□□□□□ -0.69
RAB5C-203ENST00000546881 ANKRD17O75179 2603 aaKnown RBP10.71□□□□□ -0.69
RAB5C-203ENST00000546881 A0A0G2JN53 185 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 TCRBV16S1A1N1A0A5B0 115 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 FAM90A27PA6NNH2 459 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 CDK2AP1O14519 115 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 ITGA10O75578 1167 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 TTC4O95801 387 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 F8P00451 2351 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 ENO2P09104 434 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-203ENST00000546881 TFEBP19484 476 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 CAPN3P20807 821 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 IVDP26440 423 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 TRHRP34981 398 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-203ENST00000546881 AHRP35869 848 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 CLCN2P51788 898 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 BTN3A2P78410 334 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 REEP5Q00765 189 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 PDIA2Q13087 525 aaKnown RBP10.71□□□□□ -0.69
RAB5C-203ENST00000546881 KIAA0408Q6ZU52 694 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 STRA8Q7Z7C7 330 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 CA13Q8N1Q1 262 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 ANKRD53Q8N9V6 530 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 NFAM1Q8NET5 270 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-203ENST00000546881 TRPV3Q8NET8 790 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 B3GNT7Q8NFL0 401 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 FAR2Q96K12 515 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 PWWP2AQ96N64 755 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 EGFL8Q99944 293 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 CCDC77Q9BR77 488 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 NAT9Q9BTE0 207 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 SLC6A16Q9GZN6 736 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 TRIM45Q9H8W5 580 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-203ENST00000546881 PELI2Q9HAT8 420 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 MCCC2Q9HCC0 563 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 WHRNQ9P202 907 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 IKZF3Q9UKT9 509 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 ERVK-11Q9UQG0 969 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 CHMP2BQ9UQN3 213 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 SLC22A14Q9Y267 594 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 VWA7Q9Y334 891 aa10.71□□□□□ -0.69
RAB5C-203ENST00000546881 POLQO75417 2590 aa10.7□□□□□ -0.7
RAB5C-203ENST00000546881 IGKV3D-11A0A0A0MRZ8 115 aa10.7□□□□□ -0.7
RAB5C-203ENST00000546881 NKX2-6A6NCS4 301 aa10.7□□□□□ -0.7
RAB5C-203ENST00000546881 NPEPPSL1A6NEC2 478 aa10.7□□□□□ -0.7
RAB5C-203ENST00000546881 C4orf51C9J302 202 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms