RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PTGESO14684 152 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 EPB41L2O43491 1005 aaKnown RBP1.48□□□□□ -2.17
CCDC93-209ENST00000488908 PGAM2P15259 253 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 NDST1P52848 882 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 CACNG1Q06432 222 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 GRB14Q14449 540 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 VWC2Q2TAL6 325 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 TPRX1Q8N7U7 411 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 TBCKQ8TEA7 893 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 TIGD1Q96MW7 591 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 PCDHB18PQ96TA0 734 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 FEVQ99581 238 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 CPNE1Q99829 537 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 SLC25A39Q9BZJ4 359 aaPredicted RBP1.48□□□□□ -2.17
CCDC93-209ENST00000488908 SYNCQ9H7C4 482 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 PLEKHA3Q9HB20 300 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 NTN4Q9HB63 628 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 TBC1D22BQ9NU19 505 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 SENP1Q9P0U3 644 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 CRNNQ9UBG3 495 aaPredicted RBP1.48□□□□□ -2.17
CCDC93-209ENST00000488908 UBQLN2Q9UHD9 624 aa1.48□□□□□ -2.17
CCDC93-209ENST00000488908 IGKV2-28A0A075B6P5 120 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 LMO7DNF2Z398 122 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 TRIM77I1YAP6 450 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 AP3D1O14617 1153 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 USO1O60763 962 aaKnown RBP1.47□□□□□ -2.17
CCDC93-209ENST00000488908 FRAT2O75474 233 aaPredicted RBP1.47□□□□□ -2.17
CCDC93-209ENST00000488908 IGKV2D-28P01615 120 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 ALDH3B1P43353 468 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 PPOXP50336 477 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 EIF5P55010 431 aaKnown RBP1.47□□□□□ -2.17
CCDC93-209ENST00000488908 NAP1L1P55209 391 aaKnown RBP1.47□□□□□ -2.17
CCDC93-209ENST00000488908 POLR2LP62875 67 aaKnown RBP1.47□□□□□ -2.17
CCDC93-209ENST00000488908 GNB2P62879 340 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 UBXN2AP68543 259 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 ZNF33BQ06732 778 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 RBBP7Q16576 425 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 C17orf58Q2M2W7 97 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 ARMCX4Q5H9R4 360 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 DHRS11Q6UWP2 260 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 TBC1D10CQ8IV04 446 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 MINDY1Q8N5J2 469 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 CCDC63Q8NA47 563 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 ADAMTS16Q8TE57 1224 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 JAKMIP2Q96AA8 810 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 TECTBQ96PL2 329 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 GOLPH3LQ9H4A5 285 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 DNAJC4Q9NNZ3 241 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 GDE1Q9NZC3 331 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 TMEM9Q9P0T7 183 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 FBXO7Q9Y3I1 522 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 HBS1LQ9Y450 684 aaKnown RBP1.47□□□□□ -2.17
CCDC93-209ENST00000488908 MYO10Q9HD67 2058 aa1.47□□□□□ -2.17
CCDC93-209ENST00000488908 ARHGAP23Q9P227 1491 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 A0A1W2PPM1 405 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 A0A1W2PQ09 198 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 A8MV72 311 aaPredicted RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 PSG2P11465 335 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 GOT1P17174 413 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 CTNNA2P26232 953 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 DUTP33316 252 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 MAGEA9P43362 315 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 DCAF7P61962 342 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 RPS27AP62979 156 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 PAX2Q02962 417 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 DDX10Q13206 875 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 OTPQ5XKR4 325 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 TTC27Q6P3X3 843 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 TRMT11Q7Z4G4 463 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 PRSS35Q8N3Z0 413 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 ZNF781Q8N8C0 355 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 XXYLT1Q8NBI6 393 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 TSPAN14Q8NG11 270 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 SRSF12Q8WXF0 261 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 RBM41Q96IZ5 413 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 ZHX3Q9H4I2 956 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 NOL11Q9H8H0 719 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 ANKZF1Q9H8Y5 726 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 NMUR1Q9HB89 426 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 PTCH1Q13635 1447 aa1.46□□□□□ -2.18
CCDC93-209ENST00000488908 DHX57Q6P158 1386 aaKnown RBP1.46□□□□□ -2.18
CCDC93-209ENST00000488908 ITIH6Q6UXX5 1313 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 IGHV3-35A0A0C4DH35 117 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 CCDC189A1A4V9 331 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 SAP18O00422 153 aaKnown RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 CREB3O43889 395 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 KIF5CO60282 957 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 ZBED4O75132 1171 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 PTP4A3O75365 173 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 TSPAN9O75954 239 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 RECQL5O94762 991 aaPredicted RBP1.45□□□□□ -2.18
CCDC93-209ENST00000488908 ANGPTL1O95841 491 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 SAT1P21673 171 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 GCH1P30793 250 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 HMGCLP35914 325 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 EVCP57679 992 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 RBBP4Q09028 425 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 PCLAFQ15004 111 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 TGIF1Q15583 401 aa1.45□□□□□ -2.18
CCDC93-209ENST00000488908 KCTD19Q17RG1 926 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms