RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 NDUFAF7Q7L592 441 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF605Q86T29 641 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 CA13Q8N1Q1 262 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 TMEM151AQ8N4L1 468 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 OR52B6Q8NGF0 335 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
COL5A1-206ENST00000465877 TSLPQ969D9 159 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 NSUN5Q96P11 429 aaKnown RBP12.16□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF700Q9H0M5 742 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 CLK4Q9HAZ1 481 aaKnown RBP12.16□□□□□ -0.46
COL5A1-206ENST00000465877 PRM3Q9NNZ6 103 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 DMRT3Q9NQL9 472 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 TMEM216Q9P0N5 145 aa12.16□□□□□ -0.46
COL5A1-206ENST00000465877 A0A1W2PPM1 405 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 OR2W5A6NFC9 320 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 FOXO6A8MYZ6 492 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 PSMD12O00232 456 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 OR7A17O14581 309 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 SUV39H1O43463 412 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 B3GALT2O43825 422 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 KLHL41O60662 606 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 SEC24DO94855 1032 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 GSTA1P08263 222 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 NUDT17P0C025 328 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 KRT15P19012 456 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 TAC1P20366 129 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 CCNG1P51959 295 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 BTN3A2P78410 334 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 PHEXP78562 749 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 TGM3Q08188 693 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 RASA2Q15283 850 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 COLEC12Q5KU26 742 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 ABHD17CQ6PCB6 329 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 QSOX2Q6ZRP7 698 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 RPS27LQ71UM5 84 aaKnown RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 ANKRD37Q7Z713 158 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 HPS6Q86YV9 775 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 RNF175Q8N4F7 328 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 L3MBTL4Q8NA19 623 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 OR2W6PQ8NHA6 318 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 HUS1BQ8NHY5 278 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF483Q8TF39 744 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 CAVIN3Q969G5 261 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 REPS1Q96D71 796 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 QRFPRQ96P65 431 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 KCNC2Q96PR1 638 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 CDK15Q96Q40 435 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 TMEM237Q96Q45 408 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 F2RL3Q96RI0 385 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 SERINC2Q96SA4 455 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 NPLQ9BXD5 320 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 C1QTNF3Q9BXJ4 246 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 LHPPQ9H008 270 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 EPN3Q9H201 632 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 ZNF552Q9H707 407 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 NOL11Q9H8H0 719 aaKnown RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 ZBTB26Q9HCK0 441 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 SEMA4BQ9NPR2 832 aaPredicted RBP12.15□□□□□ -0.46
COL5A1-206ENST00000465877 RNF11Q9Y3C5 154 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 TSC22D4Q9Y3Q8 395 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 PCDHGA11Q9Y5H2 935 aa12.15□□□□□ -0.46
COL5A1-206ENST00000465877 IGHV3-20A0A0C4DH32 117 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 MAGEB17A8MXT2 336 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 H0YIV9 168 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 DPM1O60762 260 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 B4GALT2O60909 372 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 SH3BGRLO75368 114 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 CLDN9O95484 217 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 CELA2AP08217 269 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 PIK3CBP42338 1070 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 CD97P48960 835 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 MTTPP55157 894 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 RAB38P57729 211 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 HERVK_113P63132 956 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 CPSF6Q16630 551 aaKnown RBP eCLIP12.14□□□□□ -0.47
COL5A1-206ENST00000465877 GGTA1PQ4G0N0 100 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 KHDRBS2Q5VWX1 349 aaKnown RBP12.14□□□□□ -0.47
COL5A1-206ENST00000465877 ZNF793Q6ZN11 406 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 ATG14Q6ZNE5 492 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 CPEB2Q7Z5Q1 589 aaKnown RBP12.14□□□□□ -0.47
COL5A1-206ENST00000465877 KBTBD2Q8IY47 623 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 CYP4X1Q8N118 509 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 RIBC1Q8N443 379 aaPredicted RBP12.14□□□□□ -0.47
COL5A1-206ENST00000465877 TEX19Q8NA77 164 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 ADAMTS18Q8TE60 1221 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 ATP6V1E2Q96A05 226 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 CMTM7Q96FZ5 175 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 THOC3Q96J01 351 aaKnown RBP12.14□□□□□ -0.47
COL5A1-206ENST00000465877 MTERF1Q99551 399 aaKnown RBP12.14□□□□□ -0.47
COL5A1-206ENST00000465877 TUBB6Q9BUF5 446 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 ERVK-6Q9BXR3 956 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 C5AR2Q9P296 337 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 ADGRE2Q9UHX3 823 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 EMCNQ9ULC0 261 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 BAHCC1Q9P281 2608 aa12.14□□□□□ -0.47
COL5A1-206ENST00000465877 MYO18BQ8IUG5 2567 aa12.13□□□□□ -0.47
COL5A1-206ENST00000465877 RTCAO00442 366 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms