RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CD81P60033 236 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ACTR3P61158 418 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 EEF1A1P68104 462 aaKnown RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CDK16Q00536 496 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 PLOD1Q02809 727 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 RELAQ04206 551 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 DMPKQ09013 629 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SNTA1Q13424 505 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 GCKRQ14397 625 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 NR1D2Q14995 579 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 TMED2Q15363 201 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SF3B4Q15427 424 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 PARP10Q53GL7 1025 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF628Q5EBL2 1059 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 HERC4Q5GLZ8 1057 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 EEF1A1P5Q5VTE0 462 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 TMEM211Q6ICI0 200 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 NEPROQ6NW34 567 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZFP1Q6P2D0 407 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 TEX38Q6PEX7 206 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 GFRALQ6UXV0 394 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 MFSD6Q6ZSS7 791 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 FAM47EQ6ZV65 393 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 LPCAT2Q7L5N7 544 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 TMPRSS12Q86WS5 348 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ODF3L1Q8IXM7 274 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 FBXO39Q8N4B4 442 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 MARVELD2Q8N4S9 558 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 METTL13Q8N6R0 699 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 KCNH5Q8NCM2 988 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 LILRB1Q8NHL6 650 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 FBXO25Q8TCJ0 367 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 GIPC3Q8TF64 312 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 U2AF1L4Q8WU68 220 aaKnown RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 FAM172AQ8WUF8 416 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 FIG4Q92562 907 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLCO2A1Q92959 643 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ERLEC1Q96DZ1 483 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 HES6Q96HZ4 224 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 NSL1Q96IY1 281 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 LYZL4Q96KX0 146 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 RIOK1Q9BRS2 568 aaKnown RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CCSER1Q9C0I3 900 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CDC42EP4Q9H3Q1 356 aaKnown RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLC38A10Q9HBR0 1119 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SELENONQ9NZV5 590 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 C6orf203Q9P0P8 240 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SEPT10Q9P0V9 454 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 PSMC3IPQ9P2W1 217 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ASIC3Q9UHC3 531 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 IL17BQ9UHF5 180 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 OSGIN1Q9UJX0 560 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 DNAJC12Q9UKB3 198 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 KCNS2Q9ULS6 477 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 PACSIN2Q9UNF0 486 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 KCNJ14Q9UNX9 436 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 EXOC7Q9UPT5 735 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CCL27Q9Y4X3 112 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRIM17Q9Y577 477 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ROBO3Q96MS0 1386 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 NHSQ6T4R5 1651 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SIPA1L1O43166 1804 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 PSME4Q14997 1843 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 MYO3BQ8WXR4 1341 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR2M5A3KFT3 312 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 C15orf62A8K5M9 175 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF587BE7ETH6 402 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 E9PMD0 336 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 DVL1O14640 695 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 XPO1O14980 1071 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 PFDN6O15212 129 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SPOPO43791 374 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SSX4O60224 188 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 RNASEH1O60930 286 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TM7SF2O76062 418 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TGDSO95455 350 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ACSL3O95573 720 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TTC4O95801 387 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 BAG2O95816 211 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 FAM106CPP0CH98 169 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SCG2P13521 617 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 EEF2P13639 858 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF23P17027 643 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TAC1P20366 129 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 ACAT1P24752 427 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 TKTP29401 623 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 SERPINB6P35237 376 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 PRKCIP41743 596 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 KLK7P49862 253 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 CSE1LP55060 971 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 CDH13P55290 713 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 POLR2FP61218 127 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 CDK3Q00526 305 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 FKBP3Q00688 224 aaKnown RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 PLIN5Q00G26 463 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 RELQ04864 619 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 RUNX1T1Q06455 604 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 DNAJC3Q13217 504 aa4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 MSLNQ13421 630 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P16-201ENST00000447155 IDI1Q13907 227 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms