RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ZNF267Q14586 743 aaPredicted RBP16.59■□□□□ 0.25
CDCP1-201ENST00000296129 ELOCQ15369 112 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 NANOGNBQ7Z5D8 188 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 TMCO6Q96DC7 493 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 PRR11Q96HE9 360 aaPredicted RBP16.59■□□□□ 0.25
CDCP1-201ENST00000296129 CENPMQ9NSP4 180 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 PRAMEF33A0A0G2JMD5 474 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 PRAMEF10O60809 474 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 ITGA10O75578 1167 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 MVKQ03426 396 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 C10orf62Q5T681 223 aaPredicted RBP16.59■□□□□ 0.25
CDCP1-201ENST00000296129 ARFGAP1Q8N6T3 406 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 YIPF7Q8N8F6 280 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 TNFAIP8L1Q8WVP5 186 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 ZNF689Q96CS4 500 aaPredicted RBP16.59■□□□□ 0.25
CDCP1-201ENST00000296129 EURLQ9NYK6 297 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 TAS2R9Q9NYW1 312 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 DNAJC27Q9NZQ0 273 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 NPIPA5E9PKD4 350 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 J3QLW9 94 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 CDC123O75794 336 aaPredicted RBP16.59■□□□□ 0.25
CDCP1-201ENST00000296129 ZNF19P17023 458 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 CBX5P45973 191 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 VBP1P61758 197 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 SLC3A1Q07837 685 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 INAVAQ3KP66 663 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 NKX2-4Q9H2Z4 354 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 NPIPA1Q9UND3 350 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 ARSFP54793 590 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 CDH11P55287 796 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 CD47Q08722 323 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 MMABQ96EY8 250 aaPredicted RBP16.59■□□□□ 0.25
CDCP1-201ENST00000296129 SYT11Q9BT88 431 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 SPATA9Q9BWV2 254 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 MBD2Q9UBB5 411 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 SPO11Q9Y5K1 396 aa16.59■□□□□ 0.25
CDCP1-201ENST00000296129 MYOCOSA0A1B0GUC4 107 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 TIMP1P01033 207 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 IFI30P13284 250 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 RNF144AP50876 292 aaPredicted RBP16.58■□□□□ 0.25
CDCP1-201ENST00000296129 NTHL1P78549 312 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 MLLT1Q03111 559 aaPredicted RBP16.58■□□□□ 0.25
CDCP1-201ENST00000296129 BNIP3Q12983 259 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 GALNT15Q8N3T1 639 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 OR4K17Q8NGC6 315 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 BBS10Q8TAM1 723 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 CASD1Q96PB1 797 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 LRRC42Q9Y546 428 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 BLOC1S5-TXNDC5H3BN57 136 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 ACADVLP49748 655 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 SLAMF1Q13291 335 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 RUNX3Q13761 415 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 FBXO43Q4G163 708 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 ZNF627Q7L945 461 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 TMEM126BQ8IUX1 230 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 GNPDA2Q8TDQ7 276 aa16.58■□□□□ 0.25
CDCP1-201ENST00000296129 TMA7Q9Y2S6 64 aaKnown RBP16.58■□□□□ 0.25
CDCP1-201ENST00000296129 SNNO75324 88 aaPredicted RBP16.58■□□□□ 0.24
CDCP1-201ENST00000296129 SRCP12931 536 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 ITGA3P26006 1051 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 ELK4P28324 431 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 KCNC1P48547 511 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 MLLT10P55197 1068 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 TMEM80Q96HE8 168 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 F2RL3Q96RI0 385 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 OR8D2Q9GZM6 311 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 WDR6Q9NNW5 1121 aaKnown RBP16.58■□□□□ 0.24
CDCP1-201ENST00000296129 SDHAF3Q9NRP4 125 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 TUBA8Q9NY65 449 aaPredicted RBP16.58■□□□□ 0.24
CDCP1-201ENST00000296129 ZNF12P17014 697 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 SH3BP2P78314 561 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 POU6F2P78424 691 aaPredicted RBP16.58■□□□□ 0.24
CDCP1-201ENST00000296129 CST6Q15828 149 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 TCEAL6Q6IPX3 200 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 NXPE4Q6UWF7 544 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 SLC36A4Q6YBV0 504 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 TAMM41Q96BW9 452 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 L3HYPDHQ96EM0 354 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 PCDHB3Q9Y5E6 796 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 GSTT2BP0CG30 244 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 HSD3B1P14060 373 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 HSD3B2P26439 372 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 TMEM164Q5U3C3 297 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 NR4A3Q92570 626 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 FUBP1Q96AE4 644 aaKnown RBP16.58■□□□□ 0.24
CDCP1-201ENST00000296129 MCHR1Q99705 422 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 METTL7AQ9H8H3 244 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 MGAT4BQ9UQ53 548 aa16.58■□□□□ 0.24
CDCP1-201ENST00000296129 A0A1B0GVT2 93 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 PSKH1P11801 424 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 HSD11B1P28845 292 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 EIF4HQ15056 248 aaKnown RBP16.57■□□□□ 0.24
CDCP1-201ENST00000296129 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.57■□□□□ 0.24
CDCP1-201ENST00000296129 PAMR1Q6UXH9 720 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 RANBP10Q6VN20 620 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 C12orf40Q86WS4 652 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 LNX2Q8N448 690 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 FANK1Q8TC84 345 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 GPR174Q9BXC1 333 aa16.57■□□□□ 0.24
CDCP1-201ENST00000296129 MVB12BQ9H7P6 319 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms