RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 RGS1Q08116 209 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 FLOT2Q14254 428 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 HLA-BQ31612 363 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 TRIM40Q6P9F5 258 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 FAM92BQ6ZTR7 304 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 PPCDCQ96CD2 204 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 ASB9Q96DX5 294 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 KCNC2Q96PR1 638 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 TRAPPC9Q96Q05 1148 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 PRPF18Q99633 342 aaKnown RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 IKZF5Q9H5V7 419 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 TEX10Q9NXF1 929 aaPredicted RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 PCDHB14Q9Y5E9 798 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 H0YGG7 62 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 RFXANKO14593 260 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 ACOT8O14734 319 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 HCRTR1O43613 425 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 ERN1O75460 977 aaKnown RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 PSMG1O95456 288 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 HIST1H1TP22492 207 aaPredicted RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 CERS1P27544 350 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 GFERP55789 205 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 ARF3P61204 181 aaPredicted RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 RELAQ04206 551 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 SNCBQ16143 134 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 LPAL2Q16609 132 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 DUOXA1Q1HG43 343 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 MPEG1Q2M385 716 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 NKAIN2Q5VXU1 208 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 R3HCC1LQ7Z5L2 792 aaKnown RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 C19orf47Q8N9M1 422 aaKnown RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 ZBTB44Q8NCP5 570 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 GAL3ST3Q96A11 431 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 THAP11Q96EK4 314 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 MAP3K3Q99759 626 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 BHLHE41Q9C0J9 482 aaPredicted RBP17.51■□□□□ 0.39
GSDMD-201ENST00000262580 FAM60AQ9NP50 221 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 ERVK-11Q9UQG0 969 aa17.51■□□□□ 0.39
GSDMD-201ENST00000262580 A0A0C4DFX4 3053 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 VPS13AQ96RL7 3174 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 SLC9B1P1A6NJY1 282 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 KIF1CO43896 1103 aaKnown RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 CPSF4O95639 269 aaKnown RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 ZNF888P0CJ79 500 aaPredicted RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 HSD17B1P14061 328 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 ATP5A1P25705 553 aaKnown RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 AVPR2P30518 371 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 RPL3P39023 403 aaKnown RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 GSK3BP49841 420 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 EPHA4P54764 986 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 LIPEQ05469 1076 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 COL9A2Q14055 689 aaPredicted RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 TRIM25Q14258 630 aaKnown RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 ANGPT1Q15389 498 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 DEFB110Q30KQ9 67 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 ZNF528Q3MIS6 628 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 RUNDC3AQ59EK9 446 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 TICAM1Q8IUC6 712 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 OR8J3Q8NGG0 315 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 ZCCHC10Q8TBK6 192 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 STMN2Q93045 179 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 CIDECQ96AQ7 238 aaPredicted RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 AURKBQ96GD4 344 aaPredicted RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 PANX1Q96RD7 426 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 TBCDQ9BTW9 1192 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 ALG2Q9H553 416 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 MIEF1Q9NQG6 463 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 NKX1-2Q9UD57 310 aaPredicted RBP17.5■□□□□ 0.39
GSDMD-201ENST00000262580 USP22Q9UPT9 525 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 KMT2EQ8IZD2 1858 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 PCDH15Q96QU1 1955 aa17.5■□□□□ 0.39
GSDMD-201ENST00000262580 PRSS51A0A1B0GVH4 220 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 NUDT21O43809 227 aaKnown RBP17.49■□□□□ 0.39
GSDMD-201ENST00000262580 DNAJA2O60884 412 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 BCAS2O75934 225 aaPredicted RBP17.49■□□□□ 0.39
GSDMD-201ENST00000262580 DDCP20711 480 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 ALDH4A1P30038 563 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 ARFIP1P53367 373 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 EEFSECP57772 596 aaKnown RBP17.49■□□□□ 0.39
GSDMD-201ENST00000262580 OR1D5P58170 312 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 IFNEQ86WN2 208 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 ACOT4Q8N9L9 421 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 BHLHE22Q8NFJ8 381 aaPredicted RBP17.49■□□□□ 0.39
GSDMD-201ENST00000262580 DNAJB8Q8NHS0 232 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 UTP15Q8TED0 518 aaKnown RBP17.49■□□□□ 0.39
GSDMD-201ENST00000262580 SAP25Q8TEE9 199 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 JADE3Q92613 823 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 RERGQ96A58 199 aaPredicted RBP17.49■□□□□ 0.39
GSDMD-201ENST00000262580 MTERF3Q96E29 417 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 CCDC115Q96NT0 180 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 TGM7Q96PF1 710 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 CPPED1Q9BRF8 314 aaPredicted RBP17.49■□□□□ 0.39
GSDMD-201ENST00000262580 RASSF4Q9H2L5 321 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 RNPEPL1Q9HAU8 725 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 CAPN10Q9HC96 672 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 NLGN3Q9NZ94 848 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 WDFY4Q6ZS81 3184 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 CABIN1Q9Y6J0 2220 aa17.49■□□□□ 0.39
GSDMD-201ENST00000262580 ANP32DO95626 131 aa17.48■□□□□ 0.39
GSDMD-201ENST00000262580 C1QCP02747 245 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms