RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SIAH2O43255 324 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 GRIN3BO60391 1043 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 DSG3P32926 999 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 RPL29P47914 159 aaKnown RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 NRIP1P48552 1158 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 GPR15P49685 360 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 NKX3-2P78367 333 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 TNFAIP1Q13829 316 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 RFTN2Q52LD8 501 aaPredicted RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 ARL13AQ5H913 290 aaPredicted RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 DRICH1Q6PGQ1 229 aaPredicted RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 ANKRD46Q86W74 232 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 SLITRK4Q8IW52 837 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 MRPL41Q8IXM3 137 aaKnown RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 OR5T1Q8NG75 326 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 COPS5Q92905 334 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 SLC41A3Q96GZ6 507 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 TMEM74Q96NL1 305 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 AMDHD1Q96NU7 426 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 PCDHB18PQ96TA0 734 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 ADAT1Q9BUB4 502 aaKnown RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 METTL17Q9H7H0 456 aaPredicted RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 FOLH1BQ9HBA9 442 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 UXTQ9UBK9 157 aaPredicted RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 OPTCQ9UBM4 332 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 RNF17Q9BXT8 1623 aaKnown RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 A0A1B0GVC2 190 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 A6NIN4 97 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 TNFRSF10BO14763 440 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 OR10H3O60404 316 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 SEC22BO75396 215 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 TXNP10599 105 aaKnown RBP8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 ZNF559Q9BR84 538 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 FZD1Q9UP38 647 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 MYH1P12882 1939 aa8.71□□□□□ -1.01
GTF2A1-203ENST00000553612 C20orf202A1L168 122 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PIAS2O75928 621 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 CIAO1O76071 339 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 CRYBA1P05813 215 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 THBS1P07996 1170 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 OR56A5P0C7T3 313 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ARSBP15848 533 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PTSQ03393 145 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 C14orf28Q4W4Y0 310 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PRAMEF20Q5VT98 475 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PTCHD4Q6ZW05 846 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 OTOP1Q7RTM1 612 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 RABEPKQ7Z6M1 372 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 TSPAN33Q86UF1 283 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PYROXD2Q8N2H3 581 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 JAGN1Q8N5M9 183 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 TCF25Q9BQ70 676 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ENAMQ9NRM1 1142 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PCDHA2Q9Y5H9 948 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM150BA6NC51 233 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 DBX1A6NMT0 343 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR171O14626 319 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 INHAP05111 366 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC10A3P09131 477 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 COX5BP10606 129 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 FGFR1P11362 822 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 CSF2RBP32927 897 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ACTA2P62736 377 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 VAMP2P63027 116 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ACTG2P63267 376 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ACTC1P68032 377 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ACTA1P68133 377 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 TAF13Q15543 124 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 AFMIDQ63HM1 303 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 OR52W1Q6IF63 320 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 KCNMB4Q86W47 210 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF34Q8IZ26 560 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 SLC22A15Q8IZD6 547 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 SFXN2Q96NB2 322 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 TMEM209Q96SK2 561 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 DTLQ9NZJ0 730 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 GPR160Q9UJ42 338 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PKP3Q9Y446 797 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PRDM15P57071 1507 aaPredicted RBP8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ANKRD12Q6UB98 2062 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ZNF26P17031 533 aaPredicted RBP8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 CTSSP25774 331 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 AHRP35869 848 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 CDK8P49336 464 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 LRRC32Q14392 662 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 MSS51Q4VC12 460 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 LRRC55Q6ZSA7 311 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 FAM122BQ7Z309 247 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PSTKQ8IV42 348 aaKnown RBP8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 STK40Q8N2I9 435 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PAPD5Q8NDF8 572 aaKnown RBP8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 ATP6V1C2Q8NEY4 427 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 BLOC1S5Q8TDH9 187 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 C22orf15Q8WYQ4 148 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 CREB3L1Q96BA8 519 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 HSPA12BQ96MM6 686 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 PNMA5Q96PV4 448 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 SLITRK1Q96PX8 696 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 NENFQ9UMX5 172 aa8.71□□□□□ -1.02
GTF2A1-203ENST00000553612 MYH2Q9UKX2 1941 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms