RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SCN3AQ9NY46 2000 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 SPENQ96T58 3664 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 IGHV1-45A0A0A0MS14 117 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 NSG1A0A0A6YYJ2 146 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 LRIT2A6NDA9 550 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 OR2W5A6NFC9 320 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 PYCARD-AS1I3L0S3 204 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 GOLGA8RI6L899 631 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 E2F3O00716 465 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 SUV39H1O43463 412 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 CHST10O43529 356 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 SLU7O95391 586 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ALPPP05187 535 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 FHP07954 510 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 EEF1DP29692 281 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ARL1P40616 181 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 SLCO1A2P46721 670 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 PLA2G16P53816 162 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 BTN3A2P78410 334 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 GTF2H2Q13888 395 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 PCBP2Q15366 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 IRAK1BP1Q5VVH5 260 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 GRHL2Q6ISB3 625 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 GTF2H2CQ6P1K8 395 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 MED27Q6P2C8 311 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ATG14Q6ZNE5 492 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 TIFABQ6ZNK6 161 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 METTL21AQ8WXB1 218 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 TBC1D20Q96BZ9 403 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 MS4A6EQ96DS6 147 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 SEC16BQ96JE7 1060 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 FAR2Q96K12 515 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 OR1F2PQ96R84 312 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 SMAD5Q99717 465 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 MRPL57Q9BQC6 102 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 CCDC77Q9BR77 488 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 REXO4Q9GZR2 422 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 MRPL46Q9H2W6 279 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 RHBGQ9H310 441 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ACTR8Q9H981 624 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ANAPC2Q9UJX6 822 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF490Q9ULM2 529 aaPredicted RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 TMCO1Q9UM00 188 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 TNPO3Q9Y5L0 923 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF462Q96JM2 2506 aa11.16□□□□□ -0.62
RAB5C-204ENST00000547517 ASH1LQ9NR48 2969 aaKnown RBP11.16□□□□□ -0.62
RAB5C-204ENST00000547517 LOC102723996A0A087X1L8 192 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 IGHV3-20A0A0C4DH32 117 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 STX16-NPEPL1H3BU86 382 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 PSMD12O00232 456 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 STX16O14662 325 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 PCDH17O14917 1159 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 B4GALT2O60909 372 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 SH3BGRLO75368 114 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 WFS1O76024 890 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 SEC24DO94855 1032 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 TBX6O95947 436 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 CYC1P08574 325 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 SMIM10L1P0DMW3 83 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 JAK1P23458 1154 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 HPDP32754 393 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 CASP2P42575 452 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 PIK3CGP48736 1102 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 Q0VFX4 171 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 DDX39BQ13838 428 aaKnown RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 E2F2Q14209 437 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 ABRAXAS2Q15018 415 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 PCOLCEQ15113 449 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 NADK2Q4G0N4 442 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 TRIM40Q6P9F5 258 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 TMEM205Q6UW68 189 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 NDUFAF7Q7L592 441 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 OR2L5Q8NG80 312 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 EPS8L3Q8TE67 593 aaKnown RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 TSLPQ969D9 159 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 UBE2E3Q969T4 207 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 SMIM10Q96HG1 83 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 THOC3Q96J01 351 aaKnown RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 F2RL3Q96RI0 385 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 MFRPQ9BY79 579 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF700Q9H0M5 742 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 EPN3Q9H201 632 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 ZNF552Q9H707 407 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 IPPKQ9H8X2 491 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 COPS7BQ9H9Q2 264 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 LANCL2Q9NS86 450 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 RIC8BQ9NVN3 520 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 LUZP4Q9P127 313 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 C19orf25Q9UFG5 118 aaPredicted RBP11.15□□□□□ -0.62
RAB5C-204ENST00000547517 PCDHGB7Q9Y5F8 929 aa11.15□□□□□ -0.62
RAB5C-204ENST00000547517 A0A088AWK7 358 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 A0A1W2PQ72 361 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 A8MT66 165 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 B3GALT2O43825 422 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 DPM1O60762 260 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 ZIC2O95409 532 aaPredicted RBP11.14□□□□□ -0.63
RAB5C-204ENST00000547517 UQCRHP07919 91 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 CELA2AP08217 269 aa11.14□□□□□ -0.63
RAB5C-204ENST00000547517 PYGBP11216 843 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms