RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NAGLUP54802 743 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 STXBP1P61764 594 aaKnown RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 RPS13P62277 151 aaKnown RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 BTN3A2P78410 334 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 HERC3Q15034 1050 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 DEFB109BQ30KR1 87 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 SGO1Q5FBB7 561 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 ABHD13Q7L211 337 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 LAPTM4BQ86VI4 370 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 OR2Y1Q8NGV0 311 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 OR51Q1Q8NH59 317 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 WDR20Q8TBZ3 569 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 RDH11Q8TC12 318 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 ADAMTS17Q8TE56 1095 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 UBE2E3Q969T4 207 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 GAL3ST3Q96A11 431 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 MIEF2Q96C03 454 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 CCDC126Q96EE4 140 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 PEX11GQ96HA9 241 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 KCNA7Q96RP8 456 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 C17orf62Q9BQA9 187 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 SORBS1Q9BX66 1292 aaKnown RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 SHCBP1LQ9BZQ2 653 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 REXO4Q9GZR2 422 aaKnown RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 SLC26A1Q9H2B4 701 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 OR51B5Q9H339 312 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 TMBIM4Q9HC24 238 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 DMRT3Q9NQL9 472 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 FARSBQ9NSD9 589 aaKnown RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 OXSMQ9NWU1 459 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 ZNF282Q9UDV7 671 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-224ENST00000523873 PKD1L2Q7Z442 2459 aa12.14□□□□□ -0.47
VEGFA-224ENST00000523873 IGLV3-12A0A075B6K2 115 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 H0YIV9 168 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 UBFD1O14562 309 aaKnown RBP12.13□□□□□ -0.47
VEGFA-224ENST00000523873 PRPF4O43172 522 aaKnown RBP eCLIP12.13□□□□□ -0.475e-8■■■□□ 16
VEGFA-224ENST00000523873 CHST10O43529 356 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 OTCP00480 354 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 ALBP02768 609 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 MYZAPP0CAP1 466 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 CERS1P27544 350 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 GSTM2P28161 218 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 XCR1P46094 333 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 DNAJB13P59910 316 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 MC1RQ01726 317 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 OCA2Q04671 838 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 KLC1Q07866 573 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 CHAF1BQ13112 559 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 RUNX2Q13950 521 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 MPP2Q14168 576 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 UGT8Q16880 541 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 LIPMQ5VYY2 423 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 FAAH2Q6GMR7 532 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 ABHD17CQ6PCB6 329 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 ZCCHC23Q6ZST2 131 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 GPRIN3Q6ZVF9 776 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 PPP1R32Q7Z5V6 425 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 UBE3DQ7Z6J8 389 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 CDYL2Q8N8U2 506 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 AGAP11Q8TF27 550 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 SNRNP27Q8WVK2 155 aaKnown RBP12.13□□□□□ -0.47
VEGFA-224ENST00000523873 EXTL1Q92935 676 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 PGM2Q96G03 612 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 QRFPRQ96P65 431 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 ZNF382Q96SR6 550 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 HBEGFQ99075 208 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 GATA5Q9BWX5 397 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-224ENST00000523873 MLXIPLQ9NP71 852 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 TNFRSF12AQ9NP84 129 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 MID1IP1Q9NPA3 183 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 KCNK9Q9NPC2 374 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 SENP1Q9P0U3 644 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 TRPS1Q9UHF7 1281 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 MID2Q9UJV3 735 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 RALYQ9UKM9 306 aaKnown RBP12.13□□□□□ -0.47
VEGFA-224ENST00000523873 MAP4K5Q9Y4K4 846 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 PCDHGA11Q9Y5H2 935 aa12.13□□□□□ -0.47
VEGFA-224ENST00000523873 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 URADA6NGE7 173 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 ARGFXA6NJG6 315 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 ALOX12BO75342 701 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 CDC123O75794 336 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-224ENST00000523873 BMP10O95393 424 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 PDYNP01213 254 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 ETV4P43268 484 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 HTR6P50406 440 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 FOXA1P55317 472 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 LCP2Q13094 533 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 ATP1A4Q13733 1029 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 TBR1Q16650 682 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 GGTA1PQ4G0N0 100 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 MFSD4BQ5TF39 518 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 KHDRBS2Q5VWX1 349 aaKnown RBP12.12□□□□□ -0.47
VEGFA-224ENST00000523873 CPZQ66K79 652 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
VEGFA-224ENST00000523873 ZNF793Q6ZN11 406 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms