RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 OPA3Q9H6K4 179 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 RANBP3Q9H6Z4 567 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 NT5DC2Q9H857 520 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 FAIMQ9NVQ4 179 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 GPATCH2Q9NW75 528 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CFAP97Q9P2B7 532 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 hCG_1809904A0A1W2PP81 198 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 A0A1W2PPE2 198 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 A0A1W2PR64 198 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 A0A1W2PRG6 482 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 A0A1W2PRV1 198 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 M0QX08 132 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 AP1G1O43747 822 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 EEDO75530 441 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 HLA-DPB1P04440 258 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 UBTFL6P0CB48 400 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 POU3F3P20264 500 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 KCNA5P22460 613 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SLC16A1P53985 500 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CRISP1P54107 249 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 HSPA14Q0VDF9 509 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 FXNQ16595 210 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CLVS2Q5SYC1 327 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TMEM63BQ5T3F8 832 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 C9orf64Q5T6V5 341 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TYW3Q6IPR3 259 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 LLGL2Q6P1M3 1020 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TLDC1Q6P9B6 456 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 RNF165Q6ZSG1 346 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SERPINA11Q86U17 422 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SPARTQ8N0X7 666 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TWIST2Q8WVJ9 160 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ITPKCQ96DU7 683 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 KCTD7Q96MP8 289 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SYT17Q9BSW7 474 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 BTBD2Q9BX70 525 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ALG9Q9H6U8 611 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SIRPGQ9P1W8 387 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ALPK3Q96L96 1907 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SLC22A31A6NKX4 558 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 UBOX5O94941 541 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 S100A9P06702 114 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SFTPCP11686 197 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MASP1P48740 699 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 C16orf59Q7L2K0 433 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ZSCAN4Q8NAM6 433 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OR52K1Q8NGK4 314 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 RNASE11Q8TAA1 199 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ZFAND2BQ8WV99 257 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 RFT1Q96AA3 541 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ARMC5Q96C12 935 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PKP4Q99569 1192 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 EXOSC4Q9NPD3 245 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MTMR10Q9NXD2 777 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MED31Q9Y3C7 131 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OR14I1A6ND48 311 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 C4orf47A7E2U8 309 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 H0YC42 278 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ENDOD1O94919 500 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 HOXC4P09017 264 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CD72P21854 359 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MMP12P39900 470 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 RPS14P62263 151 aaKnown RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 RAB41Q5JT25 222 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OR2T5Q6IEZ7 315 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 FSTL4Q6MZW2 842 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SLC25A24Q6NUK1 477 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MTFR2Q6P444 385 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 TMIGD1Q6UXZ0 262 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 RIPOR1Q6ZS17 1223 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 HTR3DQ70Z44 454 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ADGRA1Q86SQ6 560 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 DNAJC22Q8N4W6 341 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OR4K14Q8NGD5 310 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 OR2T29Q8NH02 315 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 SLC2A12Q8TD20 617 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 PIH1D2Q8WWB5 315 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CDRT15Q96T59 188 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 HDAC8Q9BY41 377 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 MMP27Q9H306 513 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 ACSS1Q9NUB1 689 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-209ENST00000511467 DAPK2Q9UIK4 370 aa4.78□□□□□ -1.64
PTPN13-209ENST00000511467 CPED1A4D0V7 1026 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 YDJCA8MPS7 323 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 RNF212BA8MTL3 300 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ZNF185O15231 689 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 OR10H3O60404 316 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PRAMEF2O60811 474 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PEX11AO75192 247 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 FAM155BO75949 473 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 MT-CO2P00403 227 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 PRKCGP05129 697 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 HTR1EP28566 365 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TAGLN2P37802 199 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 KDELC1Q6UW63 502 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TRIM74Q86UV6 250 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 TRIM73Q86UV7 250 aa4.77□□□□□ -1.65
PTPN13-209ENST00000511467 ERI1Q8IV48 349 aaKnown RBP4.77□□□□□ -1.65
PTPN13-209ENST00000511467 LSMEM2Q8N112 164 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms