RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 RAB43Q86YS6 212 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 SLC22A9Q8IVM8 553 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 ZC3H7AQ8IWR0 971 aaKnown RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 L3MBTL4Q8NA19 623 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 ARMC2Q8NEN0 867 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 OR4F6Q8NGB9 312 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 OR51Q1Q8NH59 317 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 TRPC4APQ8TEL6 797 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 PPP4R1Q8TF05 950 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 UBE2E3Q969T4 207 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 GAL3ST3Q96A11 431 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 MS4A6EQ96DS6 147 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 SMIM10Q96HG1 83 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 CATSPER2Q96P56 530 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 F2RL3Q96RI0 385 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 MTERF1Q99551 399 aaKnown RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 MESP1Q9BRJ9 268 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 CRB3Q9BUF7 120 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 NTMT1Q9BV86 223 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 RBCK1Q9BYM8 510 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 IQCGQ9H095 443 aaKnown RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 MKKSQ9NPJ1 570 aaPredicted RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 SLC17A7Q9P2U7 560 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 NXT1Q9UKK6 140 aaKnown RBP12.86□□□□□ -0.35
FDPS-219ENST00000495308 POLHQ9Y253 713 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 MAN2B2Q9Y2E5 1009 aa12.86□□□□□ -0.35
FDPS-219ENST00000495308 TNRC6AQ8NDV7 1962 aaKnown RBP12.85□□□□□ -0.35
FDPS-219ENST00000495308 ARGFXA6NJG6 315 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 CTIFO43310 598 aaKnown RBP12.85□□□□□ -0.35
FDPS-219ENST00000495308 RECKO95980 971 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 TGFB1P01137 390 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 ITGB2P05107 769 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 CPA3P15088 417 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 IMPDH1P20839 514 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 XCR1P46094 333 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 EFNA3P52797 238 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 CHAF1BQ13112 559 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 ATP1A4Q13733 1029 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 SSPNQ14714 243 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 ZRSR2Q15696 482 aaKnown RBP12.85□□□□□ -0.35
FDPS-219ENST00000495308 ADPRMQ3LIE5 342 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 MFSD4BQ5TF39 518 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 LETMD1Q6P1Q0 360 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 PPP1R32Q7Z5V6 425 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 MRGPREQ86SM8 312 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 CCNYL1Q8N7R7 359 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 HUS1BQ8NHY5 278 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 MTFMTQ96DP5 389 aaKnown RBP12.85□□□□□ -0.35
FDPS-219ENST00000495308 L3HYPDHQ96EM0 354 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 PEX11GQ96HA9 241 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 SEC16BQ96JE7 1060 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 SMC6Q96SB8 1091 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 MS4A8Q9BY19 250 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 REXO4Q9GZR2 422 aaKnown RBP12.85□□□□□ -0.35
FDPS-219ENST00000495308 DMRT3Q9NQL9 472 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 PLLPQ9Y342 182 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 KCNMB2Q9Y691 235 aa12.85□□□□□ -0.35
FDPS-219ENST00000495308 OR2W5A6NFC9 320 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 IDSB3KWA1 339 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 H0YIV9 168 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 ERVH48-1M5A8F1 160 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 MASP2O00187 686 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 SAP18O00422 153 aaKnown RBP12.84□□□□□ -0.35
FDPS-219ENST00000495308 CHST10O43529 356 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 CDC123O75794 336 aaPredicted RBP12.84□□□□□ -0.35
FDPS-219ENST00000495308 OR4F21O95013 312 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 BMP10O95393 424 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 OTCP00480 354 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 CCR10P46092 362 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 NEK2P51955 445 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 RPS13P62277 151 aaKnown RBP12.84□□□□□ -0.35
FDPS-219ENST00000495308 SKP1P63208 163 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 BTN3A2P78410 334 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 PCLAFQ15004 111 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 FAAH2Q6GMR7 532 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 TRIM40Q6P9F5 258 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 LRIG3Q6UXM1 1119 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 MILR1Q7Z6M3 343 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 OR2L5Q8NG80 312 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 WDR20Q8TBZ3 569 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 RDH11Q8TC12 318 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 TCP10LQ8TDR4 215 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 THAP4Q8WY91 577 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 FAR2Q96K12 515 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 ARHGAP9Q9BRR9 750 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 TGIF2Q9GZN2 237 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 OR51B5Q9H339 312 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 GSTO2Q9H4Y5 243 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 C14orf105Q9NVL8 296 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 OXSMQ9NWU1 459 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 C3orf18Q9UK00 162 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 ZNF225Q9UK10 706 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 PCDHGA11Q9Y5H2 935 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
FDPS-219ENST00000495308 DOCK10Q96BY6 2186 aa12.83□□□□□ -0.36
FDPS-219ENST00000495308 MAGEB17A8MXT2 336 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms