RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TMEM35AQ53FP2 167 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 VWA5B1Q5TIE3 1220 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 PRSS58Q8IYP2 241 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 GALNT16Q8N428 558 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 OR2L5Q8NG80 312 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 OR11G2Q8NGC1 345 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 AENQ8WTP8 325 aaKnown RBP17.5■□□□□ 0.39
CHTOP-202ENST00000368687 TBC1D20Q96BZ9 403 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 MS4A6EQ96DS6 147 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 SMIM10Q96HG1 83 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 KCNC2Q96PR1 638 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 IPPKQ9H8X2 491 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 PRM3Q9NNZ6 103 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 RIC8BQ9NVN3 520 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 ZNF358Q9NW07 568 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 HCN3Q9P1Z3 774 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 C5AR2Q9P296 337 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 TBK1Q9UHD2 729 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 ANAPC2Q9UJX6 822 aa17.5■□□□□ 0.39
CHTOP-202ENST00000368687 LOC102723996A0A087X1L8 192 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 H0YIV9 168 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 ERI3O43414 337 aaKnown RBP17.49■□□□□ 0.39
CHTOP-202ENST00000368687 GLRA3O75311 464 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 ALOX12BO75342 701 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 DNAJB5O75953 348 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 C8orf89P0DMQ9 161 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 RNH1P13489 461 aaKnown RBP17.49■□□□□ 0.39
CHTOP-202ENST00000368687 ICAM2P13598 275 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 PLA2G2AP14555 144 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 CD22P20273 847 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 EEF1DP29692 281 aaKnown RBP17.49■□□□□ 0.39
CHTOP-202ENST00000368687 TSFMP43897 325 aaKnown RBP17.49■□□□□ 0.39
CHTOP-202ENST00000368687 CCT5P48643 541 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 ARFIP1P53367 373 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 CHAF1BQ13112 559 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 MYBPC3Q14896 1274 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 SYT16Q17RD7 645 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 MINDY4Q4G0A6 757 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 MFSD4BQ5TF39 518 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 TMEM205Q6UW68 189 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 ASB18Q6ZVZ8 466 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 CHSY3Q70JA7 882 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 NDUFAF7Q7L592 441 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 GOLGA7Q7Z5G4 137 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 MYLK4Q86YV6 388 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-202ENST00000368687 SLC22A9Q8IVM8 553 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 MZB1Q8WU39 189 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 TM9SF4Q92544 642 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 ATP6V1E2Q96A05 226 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 CCDC126Q96EE4 140 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 PHF21BQ96EK2 531 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 CMTM7Q96FZ5 175 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 C1QTNF3Q9BXJ4 246 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 COPS7BQ9H9Q2 264 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-202ENST00000368687 ZNF490Q9ULM2 529 aaPredicted RBP17.49■□□□□ 0.39
CHTOP-202ENST00000368687 TP53TG5Q9Y2B4 290 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 STK38LQ9Y2H1 464 aa17.49■□□□□ 0.39
CHTOP-202ENST00000368687 NSG1A0A0A6YYJ2 146 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 B3GALT2O43825 422 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 PRAMEF4O60810 478 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 CLDN9O95484 217 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 SHBGP04278 402 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 FHP07954 510 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 PYGBP11216 843 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 CCNG1P51959 295 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 RAB8AP61006 207 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 NAA20P61599 178 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 IFFO1Q0D2I5 559 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 PRAMEF9Q5VWM5 478 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 RIPOR1Q6ZS17 1223 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 ZNF605Q86T29 641 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 LAPTM4BQ86VI4 370 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 L3MBTL4Q8NA19 623 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 C7orf57Q8NEG2 295 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 OR7G3Q8NG95 312 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 SERINC2Q96SA4 455 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 SMAD5Q99717 465 aaKnown RBP17.48■□□□□ 0.39
CHTOP-202ENST00000368687 NTMT1Q9BV86 223 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 ROPN1BQ9BZX4 212 aaPredicted RBP17.48■□□□□ 0.39
CHTOP-202ENST00000368687 VN1R1Q9GZP7 353 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 ROPN1Q9HAT0 212 aaPredicted RBP17.48■□□□□ 0.39
CHTOP-202ENST00000368687 PCTPQ9UKL6 214 aa17.48■□□□□ 0.39
CHTOP-202ENST00000368687 MRPS33Q9Y291 106 aaKnown RBP17.48■□□□□ 0.39
CHTOP-202ENST00000368687 A8MT66 165 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 MAGEB17A8MXT2 336 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 FFAR3O14843 346 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 GPR42O15529 346 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 CHST10O43529 356 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 SIX3O95343 332 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-202ENST00000368687 OTCP00480 354 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 RPS17P08708 135 aaKnown RBP17.47■□□□□ 0.39
CHTOP-202ENST00000368687 PCNAP12004 261 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 ATP5F1P24539 256 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-202ENST00000368687 ITGA3P26006 1051 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 HNRNPH1P31943 449 aaKnown RBP17.47■□□□□ 0.39
CHTOP-202ENST00000368687 ARL1P40616 181 aaPredicted RBP17.47■□□□□ 0.39
CHTOP-202ENST00000368687 MTTPP55157 894 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 FOXL2P58012 376 aa17.47■□□□□ 0.39
CHTOP-202ENST00000368687 HERVK_113P63132 956 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 610.5 ms