RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ARFIP1P53367 373 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 HNRNPKP61978 463 aaKnown RBP eCLIP17.31■□□□□ 0.36
VIM-201ENST00000224237 ADPRMQ3LIE5 342 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 AQP12AQ8IXF9 295 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 LMX1AQ8TE12 382 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 MIEF2Q96C03 454 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 PPCDCQ96CD2 204 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 CCDC115Q96NT0 180 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 KLHL20Q9Y2M5 609 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 PCDHB3Q9Y5E6 796 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 NCOR1O75376 2440 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 OR2A25A4D2G3 310 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 VILLO15195 856 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 TNFSF14O43557 240 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 AFF3P51826 1226 aaKnown RBP17.31■□□□□ 0.36
VIM-201ENST00000224237 SLC5A12Q1EHB4 618 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 OR4C11Q6IEV9 310 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 SPESP1Q6UW49 350 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 OOSP2Q86WS3 158 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 PROSER1Q86XN7 944 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 SDR16C5Q8N3Y7 309 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 GOLM1Q8NBJ4 401 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 TNIP2Q8NFZ5 429 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 DUS3LQ96G46 650 aaKnown RBP17.31■□□□□ 0.36
VIM-201ENST00000224237 CPPED1Q9BRF8 314 aaPredicted RBP17.31■□□□□ 0.36
VIM-201ENST00000224237 IKZF5Q9H5V7 419 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 DDX31Q9H8H2 851 aaKnown RBP17.31■□□□□ 0.36
VIM-201ENST00000224237 LHX9Q9NQ69 397 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 MIEF1Q9NQG6 463 aa17.31■□□□□ 0.36
VIM-201ENST00000224237 THADAQ6YHU6 1953 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 NVLO15381 856 aaKnown RBP17.3■□□□□ 0.36
VIM-201ENST00000224237 BCAT2O15382 392 aaPredicted RBP17.3■□□□□ 0.36
VIM-201ENST00000224237 GSNP06396 782 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 MAGP20916 626 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 FASLGP48023 281 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 C21orf59P57076 290 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 MC1RQ01726 317 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 HYAL2Q12891 473 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 SRSF5Q13243 272 aaKnown RBP17.3■□□□□ 0.36
VIM-201ENST00000224237 HEPACAMQ14CZ8 416 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 TJAP1Q5JTD0 557 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 TLDC1Q6P9B6 456 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 RNF111Q6ZNA4 994 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 UBE3DQ7Z6J8 389 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 CLECL1Q8IZS7 167 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 SRFBP1Q8NEF9 429 aaKnown RBP17.3■□□□□ 0.36
VIM-201ENST00000224237 OR2T12Q8NG77 320 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 OR10A6Q8NH74 314 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 NRG4Q8WWG1 115 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 ZNF583Q96ND8 569 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 KAT8Q9H7Z6 458 aaKnown RBP17.3■□□□□ 0.36
VIM-201ENST00000224237 HRASLS2Q9NWW9 162 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 C6orf203Q9P0P8 240 aaPredicted RBP17.3■□□□□ 0.36
VIM-201ENST00000224237 MAGEL2Q9UJ55 1249 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 KLK4Q9Y5K2 254 aa17.3■□□□□ 0.36
VIM-201ENST00000224237 AQP9O43315 295 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 EPN2O95208 641 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 DDX5P17844 614 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 SSR2P43308 183 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 CSNK1EP49674 416 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 PLA2G16P53816 162 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 TRA2BP62995 288 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 KLC1Q07866 573 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 ZNF385BQ569K4 471 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 TRIM73Q86UV7 250 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 PQLC1Q8N2U9 271 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 ZNF548Q8NEK5 533 aaPredicted RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 EDAQ92838 391 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 MS4A6EQ96DS6 147 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 KCNC2Q96PR1 638 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 C17orf62Q9BQA9 187 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 AICDAQ9GZX7 198 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 PIF1Q9H611 641 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 MDC1Q14676 2089 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 OR5K3A6NET4 321 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 EVPLLA8MZ36 301 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 YY2O15391 372 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 ERI3O43414 337 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 CPSF4O95639 269 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 DDCP20711 480 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 TSFMP43897 325 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 OR4D2P58180 307 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 STXBP1P61764 594 aaKnown RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 IRAK1BP1Q5VVH5 260 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 TRIM40Q6P9F5 258 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 ZNF621Q6ZSS3 439 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 SPPL2CQ8IUH8 684 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 OR2L5Q8NG80 312 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 TM4SF18Q96CE8 201 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 AURKBQ96GD4 344 aaPredicted RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 ZNF282Q9UDV7 671 aaPredicted RBP17.29■□□□□ 0.36
VIM-201ENST00000224237 AP4S1Q9Y587 144 aa17.29■□□□□ 0.36
VIM-201ENST00000224237 A0A0A6YYD5 115 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 A0A0J9YY10 115 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 TBX19O60806 448 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 ZCCHC18P0CG32 403 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 SLC7A1P30825 629 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 RELAQ04206 551 aa17.28■□□□□ 0.36
VIM-201ENST00000224237 RGS1Q08116 209 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms