RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 ATP5HO75947 161 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 MYO1DO94832 1006 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 UNC5CO95185 931 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 STATHP02808 62 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 THRAP10827 490 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CD59P13987 128 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CALB2P22676 271 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 TPP2P29144 1249 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 NME5P56597 212 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CLDN8P56748 225 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 C21orf58P58505 322 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CCL7P80098 99 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 SPEM2Q0P670 501 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 PTGR1Q14914 329 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CSRP2Q16527 193 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CLPPQ16740 277 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 TOR1AIP1Q5JTV8 583 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 ABHD17CQ6PCB6 329 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 BLOC1S3Q6QNY0 202 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 SNX32Q86XE0 403 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 RIMKLAQ8IXN7 391 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 FAM9CQ8IZT9 166 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 OR4N4Q8N0Y3 316 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 POU5F2Q8N7G0 328 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CAMKVQ8NCB2 501 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 IFI44Q8TCB0 444 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 TSPEARQ8WU66 669 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 ATOH1Q92858 354 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 GAL3ST3Q96A11 431 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 RGMAQ96B86 450 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CMTM5Q96DZ9 223 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 MACROD1Q9BQ69 325 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 CCDC3Q9BQI4 270 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 SORBS1Q9BX66 1292 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 EBPLQ9BY08 206 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 LRRN3Q9H3W5 708 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 DDX31Q9H8H2 851 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 PARD6AQ9NPB6 346 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 ENAMQ9NRM1 1142 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 SEMA4GQ9NTN9 838 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 TMEM9Q9P0T7 183 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 BAIAP2L1Q9UHR4 511 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 USP34Q70CQ2 3546 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 SCN2AQ99250 2005 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 FER1L5A0AVI2 2057 aa14.05□□□□□ -0.16
SHKBP1-211ENST00000595945 FAM234BA2RU67 622 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 HCRTR1O43613 425 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 PCDH7O60245 1069 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 PRMT3O60678 531 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 HNRNPCL1O60812 293 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 EEDO75530 441 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 KIAA0754O94854 1291 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 ZBTB11O95625 1053 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 LDOC1O95751 146 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 RPLP0P05388 317 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 SERPIND1P05546 499 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 SMIM10L1P0DMW3 83 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 ESRRAP11474 423 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 TGM1P22735 817 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 ACP1P24666 158 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 NCALDP61601 193 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 STXBP1P61764 594 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 DAB2P98082 770 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 CYLC2Q14093 348 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 MAPRE2Q15555 327 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 KIF26BQ2KJY2 2108 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 ZC3H12BQ5HYM0 836 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 MANEAQ5SRI9 462 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 TMEM71Q6P5X7 295 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 ZNF574Q6ZN55 896 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 USP53Q70EK8 1073 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 TMPRSS9Q7Z410 1059 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 KMT5CQ86Y97 462 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 MCATQ8IVS2 390 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 ARHGEF39Q8N4T4 335 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 GLB1L3Q8NCI6 653 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 OR2L5Q8NG80 312 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 KLHL6Q8WZ60 621 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC7A6OSQ96CW6 309 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 SMIM10Q96HG1 83 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC41A2Q96JW4 573 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 CNDP2Q96KP4 475 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 QRFPRQ96P65 431 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 DPYSL5Q9BPU6 564 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 NUDT22Q9BRQ3 303 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 CENPKQ9BS16 269 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 TBCDQ9BTW9 1192 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 SLC25A23Q9BV35 468 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 EDEM2Q9BV94 578 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 REXO4Q9GZR2 422 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 KCNH6Q9H252 994 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 RXFP3Q9NSD7 469 aa14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 ZFHX2Q9C0A1 2572 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-211ENST00000595945 A0A0A6YYD5 115 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 LOC100653049A0A140TA62 436 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 RTCAO00442 366 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 FBP2O00757 339 aa14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 TOX3O15405 576 aaPredicted RBP14.03□□□□□ -0.16
SHKBP1-211ENST00000595945 KRT34O76011 436 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms