RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 UBE2E3Q969T4 207 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 C17orf62Q9BQA9 187 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 SLC26A1Q9H2B4 701 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 PRORYQ9H606 182 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 OXSMQ9NWU1 459 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 ZNF225Q9UK10 706 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 TCFL5Q9UL49 500 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 SCN3AQ9NY46 2000 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 CCDC88CQ9P219 2028 aa11.34□□□□□ -0.59
RABGGTA-218ENST00000560777 LOC400499M0QZD8 3231 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 VSTM2BA6NLU5 285 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 ZNF891A8MT65 544 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 C4orf51C9J302 202 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 H0YIG0 161 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 SGK494L7N484 410 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 AGPSO00116 658 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 GALR3O60755 368 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 DNAJB6O75190 326 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 NSA2O95478 260 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 RECKO95980 971 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 B3GALT4O96024 378 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 CD63P08962 238 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 FURINP09958 794 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 MYZAPP0CAP1 466 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 PCNAP12004 261 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 ALOX12P18054 663 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 IL1RNP18510 177 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 HNRNPH1P31943 449 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 AVPR1BP47901 424 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 NAGLUP54802 743 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 RAB8AP61006 207 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 DSG2Q14126 1118 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 ERV3-1Q14264 604 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 HERC3Q15034 1050 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 ZRSR2Q15696 482 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 NKG7Q16617 165 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 SYT16Q17RD7 645 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 ADPRMQ3LIE5 342 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 TOR1AIP1Q5JTV8 583 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 SYVN1Q86TM6 617 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 C10orf107Q8IVU9 208 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 RNF175Q8N4F7 328 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 OR4F6Q8NGB9 312 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 HUS1BQ8NHY5 278 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 WDR20Q8TBZ3 569 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 PPP4R1Q8TF05 950 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 CCT6BQ92526 530 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 FKBP10Q96AY3 582 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 MS4A6EQ96DS6 147 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 FAM111AQ96PZ2 611 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 IQCGQ9H095 443 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 GSTO2Q9H4Y5 243 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 CTSFQ9UBX1 484 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 NAALAD2Q9Y3Q0 740 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 TSC22D4Q9Y3Q8 395 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 PCDHGA11Q9Y5H2 935 aa11.33□□□□□ -0.6
RABGGTA-218ENST00000560777 MGAQ8IWI9 3026 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 IGLV3-12A0A075B6K2 115 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 URADA6NGE7 173 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 FFAR3O14843 346 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 GPR42O15529 346 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 KLHL18O94889 574 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 OTCP00480 354 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 TGFB1P01137 390 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 FBLP22087 321 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 ALDH3A1P30838 453 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 ARL1P40616 181 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 PIK3CBP42338 1070 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 ETV4P43268 484 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 NEK2P51955 445 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 STXBP1P61764 594 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 IL10RAQ13651 578 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 MPP2Q14168 576 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 PCLAFQ15004 111 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 RBBP7Q16576 425 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 GGTA1PQ4G0N0 100 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 DEFB134Q4QY38 66 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 CRTC2Q53ET0 693 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 VWA2Q5GFL6 755 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 ATP1A1-AS1Q5TC04 95 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 FAM219BQ5XKK7 198 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 ABHD13Q7L211 337 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 UBE3DQ7Z6J8 389 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 LAPTM4BQ86VI4 370 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 CCNYL1Q8N7R7 359 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 OR2Y1Q8NGV0 311 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 STT3BQ8TCJ2 826 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 F2RL3Q96RI0 385 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 MTERF1Q99551 399 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 SPSB2Q99619 263 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 YIPF2Q9BWQ6 316 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 REXO4Q9GZR2 422 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 WDR54Q9H977 334 aa11.32□□□□□ -0.6
RABGGTA-218ENST00000560777 TMBIM4Q9HC24 238 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms