RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 OR5M3Q8NGP4 307 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 GIMAP7Q8NHV1 300 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 TMUB1Q9BVT8 246 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 PCBD2Q9H0N5 130 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 INTS10Q9NVR2 710 aaKnown RBP16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 SH2B3Q9UQQ2 575 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 SLC22A7Q9Y694 548 aa16.87■□□□□ 0.29
CHCHD3-203ENST00000448878 NDUFS4O43181 175 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 OR1F1O43749 312 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 DNAJB6O75190 326 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 TOXO94900 526 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 B3GALT4O96024 378 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 CDH1P12830 882 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 ENO3P13929 434 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 MSX1P28360 303 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 SKIV2L2P42285 1042 aaKnown RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 SKP1P63208 163 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 MEF2AQ02078 507 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 HYAL2Q12891 473 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 CTBP1Q13363 440 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 RPS6KA1Q15418 735 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 KCTD19Q17RG1 926 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 KIAA0930Q6ICG6 404 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 ARHGAP11AQ6P4F7 1023 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 PAOXQ6QHF9 649 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 C4orf22Q6V702 233 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 CYHR1Q6ZMK1 362 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 PIWIL4Q7Z3Z4 852 aaKnown RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 PALM2Q8IXS6 379 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 CLYBLQ8N0X4 340 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 MMP21Q8N119 569 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 CYP4Z2PQ8N1L4 340 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 TXLNBQ8N3L3 684 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 MFSD9Q8NBP5 474 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 CHDHQ8NE62 594 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 OR52N2Q8NGI0 321 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 GPR21Q99679 349 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 RHBGQ9H310 441 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 CCM2LQ9NUG4 571 aaPredicted RBP16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 SAMD15Q9P1V8 674 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 KCNN3Q9UGI6 736 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 FBXW2Q9UKT8 454 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 DHRS7Q9Y394 339 aa16.86■□□□□ 0.29
CHCHD3-203ENST00000448878 AVILO75366 819 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 HOXD4P09016 255 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 BTG2P78543 158 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 PLGLB1Q02325 96 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 NAE1Q13564 534 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 DHX34Q14147 1143 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 CMPK2Q5EBM0 449 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 AGTRAPQ6RW13 159 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 MBOAT1Q6ZNC8 495 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 DENND6AQ8IWF6 608 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 ZNF740Q8NDX6 193 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 SEC16BQ96JE7 1060 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 FAM129AQ9BZQ8 928 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 TRIM45Q9H8W5 580 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 DNAJB12Q9NXW2 375 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 CAPN6Q9Y6Q1 641 aa16.85■□□□□ 0.29
CHCHD3-203ENST00000448878 HCFC1P51610 2035 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 TRBV11-1A0A0K0K1C0 115 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 SAGE2PA6NJ88 616 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 NPIPA2E9PIF3 369 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 NPIPA3F8WFD2 350 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 PSMD12O00232 456 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 GALR3O60755 368 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 HOXB4P17483 251 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 ALOX12P18054 663 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 KLK2P20151 261 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 MAOAP21397 527 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 TRHRP34981 398 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 HNF4AP41235 474 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 NUP107P57740 925 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 SARNPP82979 210 aaKnown RBP16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 TFF3Q07654 80 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 CCNG2Q16589 344 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 SKOR2Q2VWA4 1001 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 ACAD11Q709F0 780 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 TGIF2LYQ8IUE0 185 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 C16orf52Q8NHV5 167 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 KCNJ9Q92806 393 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 ZNF669Q96BR6 464 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 DESI2Q9BSY9 194 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 SLC24A3Q9HC58 644 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 KLHL42Q9P2K6 505 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 ERVK-11Q9UQG0 969 aa16.84■□□□□ 0.29
CHCHD3-203ENST00000448878 TCRBV7S3A2A0A539 114 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 PABPN1LA6NDY0 278 aaKnown RBP16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 CEP104O60308 925 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 ZNF888P0CJ79 500 aaPredicted RBP16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 KCNJ1P48048 391 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 CLCN2P51788 898 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 FOLH1Q04609 750 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 TRIP13Q15645 432 aaPredicted RBP16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 ZNF585AQ6P3V2 769 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 ZNF549Q6P9A3 640 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 MDGA2Q7Z553 956 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 ARMC2Q8NEN0 867 aa16.83■□□□□ 0.28
CHCHD3-203ENST00000448878 OR5M9Q8NGP3 310 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms