RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SUCOQ9UBS9 1254 aaKnown RBP19.78■□□□□ 0.76
VSX1-206ENST00000444511 PCDHGB6Q9Y5F9 930 aa19.78■□□□□ 0.76
VSX1-206ENST00000444511 PSAT1Q9Y617 370 aa19.78■□□□□ 0.76
VSX1-206ENST00000444511 KCNE2Q9Y6J6 123 aa19.78■□□□□ 0.76
VSX1-206ENST00000444511 SVILO95425 2214 aa19.78■□□□□ 0.76
VSX1-206ENST00000444511 FAM95CA0A1B0GW59 222 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 NPEPPSL1A6NEC2 478 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 URADA6NGE7 173 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 CDC7O00311 574 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 B4GALT2O60909 372 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 DNAJB6O75190 326 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 SEC31AO94979 1220 aaKnown RBP19.77■□□□□ 0.76
VSX1-206ENST00000444511 CD96P40200 585 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 HNF4AP41235 474 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 SLC26A5P58743 744 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 GNG11P61952 73 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 OC90Q02509 493 aaPredicted RBP19.77■□□□□ 0.76
VSX1-206ENST00000444511 PDIA2Q13087 525 aaKnown RBP19.77■□□□□ 0.76
VSX1-206ENST00000444511 RBBP5Q15291 538 aaKnown RBP19.77■□□□□ 0.76
VSX1-206ENST00000444511 OR1C1Q15619 314 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.77■□□□□ 0.76
VSX1-206ENST00000444511 ZC3HC1Q86WB0 502 aaKnown RBP19.77■□□□□ 0.76
VSX1-206ENST00000444511 CREG2Q8IUH2 290 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 FBXO36Q8NEA4 188 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 TRPV3Q8NET8 790 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 UTP15Q8TED0 518 aaKnown RBP19.77■□□□□ 0.76
VSX1-206ENST00000444511 SIGLEC12Q96PQ1 595 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 NPAS2Q99743 824 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 KLHL1Q9NR64 748 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 SLC22A14Q9Y267 594 aa19.77■□□□□ 0.76
VSX1-206ENST00000444511 SCN3AQ9NY46 2000 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 GABRR3A8MPY1 467 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 PRSS44E7EML9 344 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 CD46P15529 392 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 ST13P50502 369 aaKnown RBP19.76■□□□□ 0.75
VSX1-206ENST00000444511 RAB8AP61006 207 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 ZNF460Q14592 562 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 NXPE4Q6UWF7 544 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 FRA10AC1Q70Z53 315 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 CYP4X1Q8N118 509 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 HORMAD2Q8N7B1 307 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 ANKRD53Q8N9V6 530 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 MDS2Q8NDY4 140 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 ANKRD7Q92527 254 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 VPS39Q96JC1 886 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 PTCHD1Q96NR3 888 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 CLK4Q9HAZ1 481 aaKnown RBP19.76■□□□□ 0.75
VSX1-206ENST00000444511 ENTPD4Q9Y227 616 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 SAR1BQ9Y6B6 198 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 ZGRF1Q86YA3 2104 aa19.76■□□□□ 0.75
VSX1-206ENST00000444511 USP27XA6NNY8 438 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 EFCAB8A8MWE9 144 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 CCDC188H7C350 402 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 PSMD12O00232 456 aaPredicted RBP19.75■□□□□ 0.75
VSX1-206ENST00000444511 CCL21O00585 134 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 NDC80O14777 642 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 MAN1A2O60476 641 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 PRMT3O60678 531 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 MLYCDO95822 493 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 EEF1DP29692 281 aaKnown RBP19.75■□□□□ 0.75
VSX1-206ENST00000444511 HNMTP50135 292 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 TAS2R39P59534 338 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 CDKL1Q00532 357 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 FASTKD3Q14CZ7 662 aaKnown RBP19.75■□□□□ 0.75
VSX1-206ENST00000444511 SPINK14Q6IE38 97 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 LGI4Q8N135 537 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 TMEM178AQ8NBL3 297 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 NAPGQ99747 312 aaPredicted RBP19.75■□□□□ 0.75
VSX1-206ENST00000444511 HES7Q9BYE0 225 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 SLC6A16Q9GZN6 736 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 RHBGQ9H310 441 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 CDCP1Q9H5V8 836 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 CTNNAL1Q9UBT7 734 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 SH3BGRL2Q9UJC5 107 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 OARD1Q9Y530 152 aa19.75■□□□□ 0.75
VSX1-206ENST00000444511 DIDO1Q9BTC0 2240 aaKnown RBP19.75■□□□□ 0.75
VSX1-206ENST00000444511 ARHGAP10A1A4S6 786 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 FAM227AF5H4B4 570 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 HNRNPRO43390 633 aaKnown RBP19.74■□□□□ 0.75
VSX1-206ENST00000444511 RNH1P13489 461 aaKnown RBP19.74■□□□□ 0.75
VSX1-206ENST00000444511 PAFAH1B1P43034 410 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 CA7P43166 264 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 CASP6P55212 293 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 SP5Q6BEB4 398 aaPredicted RBP19.74■□□□□ 0.75
VSX1-206ENST00000444511 MTFR2Q6P444 385 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 QSOX2Q6ZRP7 698 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 ADAMTSL2Q86TH1 951 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 RPS19BP1Q86WX3 136 aaKnown RBP19.74■□□□□ 0.75
VSX1-206ENST00000444511 ELP5Q8TE02 316 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 SCMH1Q96GD3 660 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 KLHL31Q9H511 634 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 NSMCE4AQ9NXX6 385 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 MOCS1Q9NZB8 636 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 CENPEQ02224 2701 aa19.74■□□□□ 0.75
VSX1-206ENST00000444511 CTAGE15A4D2H0 777 aa19.73■□□□□ 0.75
VSX1-206ENST00000444511 SLC19A2O60779 497 aa19.73■□□□□ 0.75
VSX1-206ENST00000444511 WDR47O94967 919 aa19.73■□□□□ 0.75
VSX1-206ENST00000444511 SERPINA6P08185 405 aa19.73■□□□□ 0.75
VSX1-206ENST00000444511 MAOAP21397 527 aa19.73■□□□□ 0.75
VSX1-206ENST00000444511 SLC12A2P55011 1212 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms