RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 HNRNPUQ00839 825 aaKnown RBP eCLIP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SMAP1Q8IYB5 467 aaPredicted RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 BUB1BO60566 1050 aaPredicted RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 WDHD1O75717 1129 aaPredicted RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PRPHP41219 470 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 USP5P45974 858 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CLNS1AP54105 237 aaKnown RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PPP1R21Q6ZMI0 780 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PALM2Q8IXS6 379 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 NAV1Q8NEY1 1877 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ZNFX1Q9P2E3 1918 aaKnown RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CCDC89Q8N998 374 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 C16orf45Q96MC5 204 aaPredicted RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 GDAP1L1Q96MZ0 367 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 HDAC5Q9UQL6 1122 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DLG5Q8TDM6 1919 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 A0A1B0GUL6 1792 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 FNBP4Q8N3X1 1017 aaPredicted RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ACRBPQ8NEB7 543 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 LZICQ8WZA0 190 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DDX23Q9BUQ8 820 aaKnown RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 IQCGQ9H095 443 aaKnown RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ZC4H2Q9NQZ6 224 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SHPRHQ149N8 1683 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 STAMBPO95630 424 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DKK3Q9UBP4 350 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 COMMD10Q9Y6G5 202 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 GIMAP4Q9NUV9 329 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PRAG1Q86YV5 1406 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 WDR91A4D1P6 747 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 GFAPP14136 432 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PSMC4P43686 418 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SPATS2Q86XZ4 545 aaKnown RBP3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ZNF354CQ86Y25 554 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ANKRD24Q8TF21 1146 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CHGBP05060 677 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 MSL3P1P0C860 447 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TUBA4AP68366 448 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CRACR2AQ9BSW2 395 aa3.38□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 VGLL3A8MV65 326 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CLTAP09496 248 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 NBPF7P0C2Y1 421 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 STMN1P16949 149 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ZFXP17010 805 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 COPB2P35606 906 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ATP6V1E1P36543 226 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 NBPF11Q86T75 865 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DDX27Q96GQ7 796 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 YY1AP1Q9H869 796 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DAAM1Q9Y4D1 1078 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 FOSP01100 380 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 GNL1P36915 607 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ANKRD20A12PQ8NF67 263 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 GSDMBQ8TAX9 411 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CCDC47Q96A33 483 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SMC6Q96SB8 1091 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 EXOC1Q9NV70 894 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ZMYM4Q5VZL5 1548 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 UBR1Q8IWV7 1749 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SMIM23A6NLE4 172 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 WASLO00401 505 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 EFHD2Q96C19 240 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DIABLOQ9NR28 239 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TOMM22Q9NS69 142 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CAMTA1Q9Y6Y1 1673 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 FMN2Q9NZ56 1722 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 EIF2S1P05198 315 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 KRT5P13647 590 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CCDC178Q5BJE1 867 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SMARCE1Q969G3 411 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 FSD1Q9BTV5 496 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 THEGQ9P2T0 379 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ATAD2Q6PL18 1390 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 YEATS4O95619 227 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SKILP12757 684 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 POLD1P28340 1107 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 RANBP1P43487 201 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 OLR1P78380 273 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 IFFO1Q0D2I5 559 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ILF2Q12905 390 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PSMD6Q15008 389 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PSMA8Q8TAA3 256 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 SIL1Q9H173 461 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ESF1Q9H501 851 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 XIRP1Q702N8 1843 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CCDC159P0C7I6 412 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 FOSL1P15407 271 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DESP17661 470 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 AAMPQ13685 434 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 CCDC83Q8IWF9 413 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 ALS2CR12Q96Q35 445 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PHF23Q9BUL5 403 aaPredicted RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 GOLGA3Q08378 1498 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 DYNC1I1O14576 645 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 TRIM21P19474 475 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 OPTNQ96CV9 577 aa3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 IPO9Q96P70 1041 aaKnown RBP3.37□□□□□ -1.87
KCNIP4-IT1-201ENST00000627566 PALM3A6NDB9 673 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms