RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 BNIP3LO60238 219 aa10.77□□□□□ -0.69
VPS29-212ENST00000621131 ZDHHC1Q8WTX9 485 aa10.77□□□□□ -0.69
VPS29-212ENST00000621131 ACDQ96AP0 544 aa10.77□□□□□ -0.69
VPS29-212ENST00000621131 PPP1R12CQ9BZL4 782 aa10.77□□□□□ -0.69
VPS29-212ENST00000621131 ZDHHC3Q9NYG2 299 aa10.77□□□□□ -0.69
VPS29-212ENST00000621131 PHF24Q9UPV7 400 aa10.77□□□□□ -0.69
VPS29-212ENST00000621131 PARP3Q9Y6F1 533 aa10.77□□□□□ -0.69
VPS29-212ENST00000621131 TEAD4Q15561 434 aa10.76□□□□□ -0.69
VPS29-212ENST00000621131 SIX5Q8N196 739 aa10.76□□□□□ -0.69
VPS29-212ENST00000621131 NLRP8Q86W28 1048 aa10.75□□□□□ -0.69
VPS29-212ENST00000621131 SLC9A9Q8IVB4 645 aa10.75□□□□□ -0.69
VPS29-212ENST00000621131 ZIC5Q96T25 663 aa10.75□□□□□ -0.69
VPS29-212ENST00000621131 ZCCHC2Q9C0B9 1178 aaKnown RBP10.75□□□□□ -0.69
VPS29-212ENST00000621131 A0A1W2PNR3 127 aa10.74□□□□□ -0.69
VPS29-212ENST00000621131 M0R2N6 131 aa10.74□□□□□ -0.69
VPS29-212ENST00000621131 NOS2P35228 1153 aa10.74□□□□□ -0.69
VPS29-212ENST00000621131 GSK3AP49840 483 aa10.74□□□□□ -0.69
VPS29-212ENST00000621131 KCNMA1Q12791 1236 aa10.74□□□□□ -0.69
VPS29-212ENST00000621131 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
VPS29-212ENST00000621131 TBCELQ5QJ74 424 aa10.74□□□□□ -0.69
VPS29-212ENST00000621131 ATXN7L1Q9ULK2 861 aaPredicted RBP10.74□□□□□ -0.69
VPS29-212ENST00000621131 NSFL1CQ9UNZ2 370 aaKnown RBP10.74□□□□□ -0.69
VPS29-212ENST00000621131 BCRP11274 1271 aa10.73□□□□□ -0.69
VPS29-212ENST00000621131 TXLNAP40222 546 aa10.73□□□□□ -0.69
VPS29-212ENST00000621131 KANK4Q5T7N3 995 aaPredicted RBP10.73□□□□□ -0.69
VPS29-212ENST00000621131 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
VPS29-212ENST00000621131 KLRG1Q96E93 195 aa10.73□□□□□ -0.69
VPS29-212ENST00000621131 ABHD17AQ96GS6 310 aa10.73□□□□□ -0.69
VPS29-212ENST00000621131 ZNF777Q9ULD5 760 aaPredicted RBP10.73□□□□□ -0.69
VPS29-212ENST00000621131 PCDHGC4Q9Y5F7 938 aa10.73□□□□□ -0.69
VPS29-212ENST00000621131 C2CD2LO14523 706 aa10.72□□□□□ -0.69
VPS29-212ENST00000621131 TATP17735 454 aaPredicted RBP10.72□□□□□ -0.69
VPS29-212ENST00000621131 MAP2K3P46734 347 aa10.72□□□□□ -0.69
VPS29-212ENST00000621131 MAP3K10Q02779 954 aa10.72□□□□□ -0.69
VPS29-212ENST00000621131 ARSJQ5FYB0 599 aaPredicted RBP10.72□□□□□ -0.69
VPS29-212ENST00000621131 FIGNL1Q6PIW4 674 aa10.72□□□□□ -0.69
VPS29-212ENST00000621131 C7orf43Q8WVR3 580 aa10.72□□□□□ -0.69
VPS29-212ENST00000621131 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
VPS29-212ENST00000621131 RASA1P20936 1047 aa10.71□□□□□ -0.69
VPS29-212ENST00000621131 CTBSQ01459 385 aa10.71□□□□□ -0.69
VPS29-212ENST00000621131 ZNF594Q96JF6 807 aaPredicted RBP10.71□□□□□ -0.69
VPS29-212ENST00000621131 HCN2Q9UL51 889 aa10.71□□□□□ -0.69
VPS29-212ENST00000621131 FGFR3P22607 806 aa10.7□□□□□ -0.7
VPS29-212ENST00000621131 TSPAN10Q9H1Z9 355 aaPredicted RBP10.7□□□□□ -0.7
VPS29-212ENST00000621131 ENAMQ9NRM1 1142 aa10.7□□□□□ -0.7
VPS29-212ENST00000621131 LRRC4BQ9NT99 713 aa10.7□□□□□ -0.7
VPS29-212ENST00000621131 EML1O00423 815 aa10.69□□□□□ -0.7
VPS29-212ENST00000621131 ATXN7O15265 892 aaPredicted RBP10.69□□□□□ -0.7
VPS29-212ENST00000621131 LMOD1P29536 600 aaPredicted RBP10.69□□□□□ -0.7
VPS29-212ENST00000621131 SH3PXD2AQ5TCZ1 1133 aa10.69□□□□□ -0.7
VPS29-212ENST00000621131 TSEN2Q8NCE0 465 aaKnown RBP10.69□□□□□ -0.7
VPS29-212ENST00000621131 OXCT2Q9BYC2 517 aaPredicted RBP10.69□□□□□ -0.7
VPS29-212ENST00000621131 SERTM1A2A2V5 107 aa10.68□□□□□ -0.7
VPS29-212ENST00000621131 OIP5O43482 229 aa10.68□□□□□ -0.7
VPS29-212ENST00000621131 MARSP56192 900 aaKnown RBP10.68□□□□□ -0.7
VPS29-212ENST00000621131 TNP2Q05952 138 aa10.68□□□□□ -0.7
VPS29-212ENST00000621131 PTK7Q13308 1070 aa10.68□□□□□ -0.7
VPS29-212ENST00000621131 POTEAQ6S8J7 498 aa10.68□□□□□ -0.7
VPS29-212ENST00000621131 CRTC2Q53ET0 693 aaPredicted RBP10.67□□□□□ -0.7
VPS29-212ENST00000621131 LARP1Q6PKG0 1096 aaKnown RBP10.67□□□□□ -0.7
VPS29-212ENST00000621131 C1orf229Q6ZS94 237 aaPredicted RBP10.67□□□□□ -0.7
VPS29-212ENST00000621131 ZNF232Q9UNY5 417 aa10.67□□□□□ -0.7
VPS29-212ENST00000621131 C21orf2O43822 256 aa10.66□□□□□ -0.7
VPS29-212ENST00000621131 MAPTP10636 758 aaKnown RBP10.66□□□□□ -0.7
VPS29-212ENST00000621131 BMP4P12644 408 aa10.66□□□□□ -0.7
VPS29-212ENST00000621131 SEC13P55735 322 aa10.66□□□□□ -0.7
VPS29-212ENST00000621131 PSMA6P60900 246 aaKnown RBP10.66□□□□□ -0.7
VPS29-212ENST00000621131 CFAP70Q5T0N1 1121 aa10.66□□□□□ -0.7
VPS29-212ENST00000621131 BICDL1Q6ZP65 573 aa10.66□□□□□ -0.7
VPS29-212ENST00000621131 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
VPS29-212ENST00000621131 RBM19Q9Y4C8 960 aaKnown RBP10.66□□□□□ -0.7
VPS29-212ENST00000621131 HIRAP54198 1017 aaPredicted RBP10.65□□□□□ -0.7
VPS29-212ENST00000621131 SAMD5Q5TGI4 173 aa10.65□□□□□ -0.7
VPS29-212ENST00000621131 ATAD2Q6PL18 1390 aa10.65□□□□□ -0.71
VPS29-212ENST00000621131 FAM157BP0CG42 384 aa10.64□□□□□ -0.71
VPS29-212ENST00000621131 RASSF7Q02833 373 aa10.64□□□□□ -0.71
VPS29-212ENST00000621131 SCARF2Q96GP6 870 aaPredicted RBP10.64□□□□□ -0.71
VPS29-212ENST00000621131 GDF2Q9UK05 429 aaPredicted RBP10.64□□□□□ -0.71
VPS29-212ENST00000621131 HCN4Q9Y3Q4 1203 aa10.64□□□□□ -0.71
VPS29-212ENST00000621131 GJA3Q9Y6H8 435 aa10.64□□□□□ -0.71
VPS29-212ENST00000621131 DCDC2BA2VCK2 349 aa10.63□□□□□ -0.71
VPS29-212ENST00000621131 FAM196BA6NMK8 535 aa10.63□□□□□ -0.71
VPS29-212ENST00000621131 RNF225M0QZC1 329 aaPredicted RBP10.63□□□□□ -0.71
VPS29-212ENST00000621131 KHNYNO15037 678 aaKnown RBP10.63□□□□□ -0.71
VPS29-212ENST00000621131 DPYDQ12882 1025 aa10.63□□□□□ -0.71
VPS29-212ENST00000621131 FAM182BQ5T319 152 aa10.63□□□□□ -0.71
VPS29-212ENST00000621131 C1orf53Q5VUE5 145 aa10.63□□□□□ -0.71
VPS29-212ENST00000621131 GALNT6Q8NCL4 622 aa10.63□□□□□ -0.71
VPS29-212ENST00000621131 NEDD1Q8NHV4 660 aa10.63□□□□□ -0.71
VPS29-212ENST00000621131 GPC6Q9Y625 555 aaPredicted RBP10.63□□□□□ -0.71
VPS29-212ENST00000621131 USP17L15C9J2P7 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L10C9JJH3 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L13C9JLJ4 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L12C9JPN9 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L11C9JVI0 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L21D6R901 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L18D6R9N7 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L22D6RA61 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L17D6RBQ6 530 aa10.62□□□□□ -0.71
VPS29-212ENST00000621131 USP17L19D6RCP7 530 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms