RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CCDC82Q8N4S0 544 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 GMCL1Q96IK5 515 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 CABP1Q9NZU7 370 aa7.38□□□□□ -1.23
VAPA-206ENST00000583475 THBS1P07996 1170 aa7.37□□□□□ -1.23
VAPA-206ENST00000583475 PLA2G4AP47712 749 aa7.37□□□□□ -1.23
VAPA-206ENST00000583475 TEAD4Q15561 434 aa7.37□□□□□ -1.23
VAPA-206ENST00000583475 ZDHHC1Q8WTX9 485 aa7.37□□□□□ -1.23
VAPA-206ENST00000583475 ZNF837Q96EG3 531 aaPredicted RBP7.37□□□□□ -1.23
VAPA-206ENST00000583475 TSPAN10Q9H1Z9 355 aaPredicted RBP7.37□□□□□ -1.23
VAPA-206ENST00000583475 GPAMQ9HCL2 828 aa7.37□□□□□ -1.23
VAPA-206ENST00000583475 PARP3Q9Y6F1 533 aa7.37□□□□□ -1.23
VAPA-206ENST00000583475 C21orf2O43822 256 aa7.36□□□□□ -1.23
VAPA-206ENST00000583475 NOS2P35228 1153 aa7.36□□□□□ -1.23
VAPA-206ENST00000583475 L3MBTL2Q969R5 705 aa7.36□□□□□ -1.23
VAPA-206ENST00000583475 AIDAQ96BJ3 306 aa7.36□□□□□ -1.23
VAPA-206ENST00000583475 ATAD2Q6PL18 1390 aa7.35□□□□□ -1.23
VAPA-206ENST00000583475 H7C1W4 665 aa7.35□□□□□ -1.23
VAPA-206ENST00000583475 ATP4AP20648 1035 aa7.35□□□□□ -1.23
VAPA-206ENST00000583475 KRT76Q01546 638 aa7.35□□□□□ -1.23
VAPA-206ENST00000583475 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
VAPA-206ENST00000583475 HINFPQ9BQA5 517 aa7.35□□□□□ -1.23
VAPA-206ENST00000583475 RUBCNLQ9H714 662 aa7.35□□□□□ -1.23
VAPA-206ENST00000583475 SUPT5HO00267 1087 aaKnown RBP7.34□□□□□ -1.23
VAPA-206ENST00000583475 LGR5O75473 907 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 ATG7O95352 703 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 INSM1Q01101 510 aaPredicted RBP7.34□□□□□ -1.23
VAPA-206ENST00000583475 UBAP2LQ14157 1087 aaKnown RBP7.34□□□□□ -1.23
VAPA-206ENST00000583475 ELOAQ14241 798 aaKnown RBP7.34□□□□□ -1.23
VAPA-206ENST00000583475 SH3PXD2AQ5TCZ1 1133 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 POTEAQ6S8J7 498 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 C1orf216Q8TAB5 229 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 C7orf43Q8WVR3 580 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 PBXIP1Q96AQ6 731 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 COL25A1Q9BXS0 654 aaPredicted RBP7.34□□□□□ -1.23
VAPA-206ENST00000583475 NUCKS1Q9H1E3 243 aaKnown RBP7.34□□□□□ -1.23
VAPA-206ENST00000583475 CRISPLD1Q9H336 500 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 ZMIZ1Q9ULJ6 1067 aa7.34□□□□□ -1.23
VAPA-206ENST00000583475 NOVA2Q9UNW9 492 aaKnown RBP7.34□□□□□ -1.23
VAPA-206ENST00000583475 SERTM1A2A2V5 107 aa7.33□□□□□ -1.24
VAPA-206ENST00000583475 EML1O00423 815 aa7.33□□□□□ -1.24
VAPA-206ENST00000583475 TXLNAP40222 546 aa7.33□□□□□ -1.24
VAPA-206ENST00000583475 RNFT1Q5M7Z0 435 aa7.33□□□□□ -1.24
VAPA-206ENST00000583475 SCG3Q8WXD2 468 aaKnown RBP7.33□□□□□ -1.24
VAPA-206ENST00000583475 GTPBP3Q969Y2 492 aaKnown RBP7.33□□□□□ -1.24
VAPA-206ENST00000583475 ZDHHC3Q9NYG2 299 aa7.33□□□□□ -1.24
VAPA-206ENST00000583475 GPR25O00155 361 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 PPP1R12BO60237 982 aaPredicted RBP7.32□□□□□ -1.24
VAPA-206ENST00000583475 CSB-PGBD3P0DP91 1061 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 PSMA6P60900 246 aaKnown RBP7.32□□□□□ -1.24
VAPA-206ENST00000583475 GAS6Q14393 721 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 NBPF1Q3BBV0 1214 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 PGBD3Q8N328 593 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 GAS2L2Q8NHY3 880 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 CNTNAP3BQ96NU0 1288 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 ZIC5Q96T25 663 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 CNTNAP3Q9BZ76 1288 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 ZNF232Q9UNY5 417 aa7.32□□□□□ -1.24
VAPA-206ENST00000583475 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
VAPA-206ENST00000583475 FAM69CQ0P6D2 419 aa7.31□□□□□ -1.24
VAPA-206ENST00000583475 LBRQ14739 615 aaKnown RBP7.31□□□□□ -1.24
VAPA-206ENST00000583475 STAG2Q8N3U4 1231 aa7.31□□□□□ -1.24
VAPA-206ENST00000583475 C2orf49Q9BVC5 232 aaPredicted RBP7.31□□□□□ -1.24
VAPA-206ENST00000583475 HCN4Q9Y3Q4 1203 aa7.31□□□□□ -1.24
VAPA-206ENST00000583475 A0A1W2PNR3 127 aa7.3□□□□□ -1.24
VAPA-206ENST00000583475 TATP17735 454 aaPredicted RBP7.3□□□□□ -1.24
VAPA-206ENST00000583475 WEE1P30291 646 aa7.3□□□□□ -1.24
VAPA-206ENST00000583475 HIRAP54198 1017 aaPredicted RBP7.3□□□□□ -1.24
VAPA-206ENST00000583475 ARSJQ5FYB0 599 aaPredicted RBP7.3□□□□□ -1.24
VAPA-206ENST00000583475 EFHC2Q5JST6 749 aa7.3□□□□□ -1.24
VAPA-206ENST00000583475 FOXR1Q6PIV2 292 aa7.3□□□□□ -1.24
VAPA-206ENST00000583475 STK32AQ8WU08 396 aa7.3□□□□□ -1.24
VAPA-206ENST00000583475 KLRG1Q96E93 195 aa7.3□□□□□ -1.24
VAPA-206ENST00000583475 ACIN1Q9UKV3 1341 aaKnown RBP7.29□□□□□ -1.24
VAPA-206ENST00000583475 IGFBP4P22692 258 aa7.29□□□□□ -1.24
VAPA-206ENST00000583475 NLRP8Q86W28 1048 aa7.29□□□□□ -1.24
VAPA-206ENST00000583475 CHMP7Q8WUX9 453 aaPredicted RBP7.29□□□□□ -1.24
VAPA-206ENST00000583475 CFHR5Q9BXR6 569 aa7.29□□□□□ -1.24
VAPA-206ENST00000583475 ZCCHC2Q9C0B9 1178 aaKnown RBP7.29□□□□□ -1.24
VAPA-206ENST00000583475 NDFIP2Q9NV92 336 aa7.29□□□□□ -1.24
VAPA-206ENST00000583475 STK17AQ9UEE5 414 aa7.29□□□□□ -1.24
VAPA-206ENST00000583475 TMEM164Q5U3C3 297 aa7.28□□□□□ -1.24
VAPA-206ENST00000583475 C1orf53Q5VUE5 145 aa7.28□□□□□ -1.24
VAPA-206ENST00000583475 CHMP3Q9Y3E7 222 aa7.28□□□□□ -1.24
VAPA-206ENST00000583475 BNIP3LO60238 219 aa7.27□□□□□ -1.25
VAPA-206ENST00000583475 PPP1R15AO75807 674 aaPredicted RBP7.27□□□□□ -1.25
VAPA-206ENST00000583475 SWI5Q1ZZU3 235 aa7.27□□□□□ -1.25
VAPA-206ENST00000583475 BICDL1Q6ZP65 573 aa7.27□□□□□ -1.25
VAPA-206ENST00000583475 ALDH16A1Q8IZ83 802 aa7.27□□□□□ -1.25
VAPA-206ENST00000583475 TRERF1Q96PN7 1200 aa7.27□□□□□ -1.25
VAPA-206ENST00000583475 PHACTR1Q9C0D0 580 aa7.27□□□□□ -1.25
VAPA-206ENST00000583475 PCDHGC4Q9Y5F7 938 aa7.27□□□□□ -1.25
VAPA-206ENST00000583475 SLURP2P0DP57 97 aa7.26□□□□□ -1.25
VAPA-206ENST00000583475 FIGNL1Q6PIW4 674 aa7.26□□□□□ -1.25
VAPA-206ENST00000583475 ABHD17AQ96GS6 310 aa7.26□□□□□ -1.25
VAPA-206ENST00000583475 PRIMPOLQ96LW4 560 aa7.26□□□□□ -1.25
VAPA-206ENST00000583475 HCN2Q9UL51 889 aa7.26□□□□□ -1.25
VAPA-206ENST00000583475 ATXN7O15265 892 aaPredicted RBP7.25□□□□□ -1.25
VAPA-206ENST00000583475 SRSF11Q05519 484 aaKnown RBP7.25□□□□□ -1.25
VAPA-206ENST00000583475 OCLNQ16625 522 aa7.25□□□□□ -1.25
VAPA-206ENST00000583475 LRRC69Q6ZNQ3 347 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms