RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 MTFR1LQ9H019 292 aa13.97□□□□□ -0.17
ABCA3-205ENST00000567910 UTRNP46939 3433 aa13.97□□□□□ -0.17
ABCA3-205ENST00000567910 SOS1Q07889 1333 aaPredicted RBP13.96□□□□□ -0.17
ABCA3-205ENST00000567910 NGEFQ8N5V2 710 aa13.96□□□□□ -0.17
ABCA3-205ENST00000567910 SPON1Q9HCB6 807 aa13.96□□□□□ -0.17
ABCA3-205ENST00000567910 CCDC87Q9NVE4 849 aa13.96□□□□□ -0.17
ABCA3-205ENST00000567910 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
ABCA3-205ENST00000567910 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
ABCA3-205ENST00000567910 EIF4A1P60842 406 aaKnown RBP13.95□□□□□ -0.18
ABCA3-205ENST00000567910 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
ABCA3-205ENST00000567910 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
ABCA3-205ENST00000567910 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
ABCA3-205ENST00000567910 CHL1O00533 1208 aa13.94□□□□□ -0.18
ABCA3-205ENST00000567910 A1BGP04217 495 aa13.94□□□□□ -0.18
ABCA3-205ENST00000567910 ZNF853P0CG23 659 aa13.94□□□□□ -0.18
ABCA3-205ENST00000567910 LMOD3Q0VAK6 560 aa13.94□□□□□ -0.18
ABCA3-205ENST00000567910 KRT24Q2M2I5 525 aa13.94□□□□□ -0.18
ABCA3-205ENST00000567910 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
ABCA3-205ENST00000567910 MSH5O43196 834 aa13.93□□□□□ -0.18
ABCA3-205ENST00000567910 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
ABCA3-205ENST00000567910 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
ABCA3-205ENST00000567910 FLAD1Q8NFF5 587 aa13.93□□□□□ -0.18
ABCA3-205ENST00000567910 SRP68Q9UHB9 627 aaKnown RBP13.93□□□□□ -0.18
ABCA3-205ENST00000567910 TSPYL4Q9UJ04 414 aa13.93□□□□□ -0.18
ABCA3-205ENST00000567910 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
ABCA3-205ENST00000567910 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
ABCA3-205ENST00000567910 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
ABCA3-205ENST00000567910 EIF5P55010 431 aaKnown RBP13.92□□□□□ -0.18
ABCA3-205ENST00000567910 TRAPPC3LQ5T215 181 aa13.92□□□□□ -0.18
ABCA3-205ENST00000567910 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
ABCA3-205ENST00000567910 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
ABCA3-205ENST00000567910 COL15A1P39059 1388 aa13.92□□□□□ -0.18
ABCA3-205ENST00000567910 BCORQ6W2J9 1755 aa13.91□□□□□ -0.18
ABCA3-205ENST00000567910 GYS1P13807 737 aa13.91□□□□□ -0.18
ABCA3-205ENST00000567910 ADRA2BP18089 450 aa13.91□□□□□ -0.18
ABCA3-205ENST00000567910 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
ABCA3-205ENST00000567910 CANXP27824 592 aaKnown RBP13.91□□□□□ -0.18
ABCA3-205ENST00000567910 WWC1Q8IX03 1113 aa13.91□□□□□ -0.18
ABCA3-205ENST00000567910 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
ABCA3-205ENST00000567910 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
ABCA3-205ENST00000567910 STARD3NLO95772 234 aa13.9□□□□□ -0.18
ABCA3-205ENST00000567910 CCDC27Q2M243 656 aa13.9□□□□□ -0.18
ABCA3-205ENST00000567910 MBIPQ9NS73 344 aa13.9□□□□□ -0.18
ABCA3-205ENST00000567910 BABAM1Q9NWV8 329 aa13.9□□□□□ -0.18
ABCA3-205ENST00000567910 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
ABCA3-205ENST00000567910 CFAP44Q96MT7 982 aa13.89□□□□□ -0.19
ABCA3-205ENST00000567910 TEX13AQ9BXU3 409 aaPredicted RBP13.89□□□□□ -0.19
ABCA3-205ENST00000567910 CENPBP07199 599 aaPredicted RBP13.88□□□□□ -0.19
ABCA3-205ENST00000567910 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
ABCA3-205ENST00000567910 FKBP8Q14318 412 aa13.88□□□□□ -0.19
ABCA3-205ENST00000567910 LRP10Q7Z4F1 713 aa13.88□□□□□ -0.19
ABCA3-205ENST00000567910 ARXQ96QS3 562 aa13.88□□□□□ -0.19
ABCA3-205ENST00000567910 IFT57Q9NWB7 429 aa13.88□□□□□ -0.19
ABCA3-205ENST00000567910 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
ABCA3-205ENST00000567910 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
ABCA3-205ENST00000567910 RFC4P35249 363 aa13.87□□□□□ -0.19
ABCA3-205ENST00000567910 IL6STP40189 918 aaPredicted RBP13.87□□□□□ -0.19
ABCA3-205ENST00000567910 GOLGA2Q08379 1002 aa13.87□□□□□ -0.19
ABCA3-205ENST00000567910 PDIA6Q15084 440 aa13.87□□□□□ -0.19
ABCA3-205ENST00000567910 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
ABCA3-205ENST00000567910 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
ABCA3-205ENST00000567910 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
ABCA3-205ENST00000567910 KIF13BQ9NQT8 1826 aa13.87□□□□□ -0.19
ABCA3-205ENST00000567910 ZNF521Q96K83 1311 aa13.87□□□□□ -0.19
ABCA3-205ENST00000567910 AFDNP55196 1824 aaKnown RBP13.86□□□□□ -0.19
ABCA3-205ENST00000567910 DDR1Q08345 913 aa13.86□□□□□ -0.19
ABCA3-205ENST00000567910 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
ABCA3-205ENST00000567910 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
ABCA3-205ENST00000567910 NARFQ9UHQ1 456 aa13.86□□□□□ -0.19
ABCA3-205ENST00000567910 NRXN2Q9P2S2 1712 aa13.86□□□□□ -0.19
ABCA3-205ENST00000567910 MMP10P09238 476 aa13.85□□□□□ -0.19
ABCA3-205ENST00000567910 TSR2Q969E8 191 aaKnown RBP13.85□□□□□ -0.19
ABCA3-205ENST00000567910 TBC1D2BQ9UPU7 963 aa13.85□□□□□ -0.19
ABCA3-205ENST00000567910 CAMTA2O94983 1202 aa13.84□□□□□ -0.19
ABCA3-205ENST00000567910 ANXA1P04083 346 aa13.84□□□□□ -0.19
ABCA3-205ENST00000567910 POLD1P28340 1107 aa13.84□□□□□ -0.19
ABCA3-205ENST00000567910 TM4SF1P30408 202 aa13.84□□□□□ -0.19
ABCA3-205ENST00000567910 C8orf58Q8NAV2 365 aa13.84□□□□□ -0.19
ABCA3-205ENST00000567910 SYT17Q9BSW7 474 aa13.84□□□□□ -0.19
ABCA3-205ENST00000567910 PPP1R1BQ9UD71 204 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-205ENST00000567910 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
ABCA3-205ENST00000567910 E9PSI1 815 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 GNAI1P63096 354 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 NFIXQ14938 502 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 NLGN2Q8NFZ4 835 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 IL16Q14005 1332 aa13.83□□□□□ -0.2
ABCA3-205ENST00000567910 C10orf71Q711Q0 1435 aa13.82□□□□□ -0.2
ABCA3-205ENST00000567910 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
ABCA3-205ENST00000567910 EIF2S2P20042 333 aaKnown RBP13.82□□□□□ -0.2
ABCA3-205ENST00000567910 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
ABCA3-205ENST00000567910 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
ABCA3-205ENST00000567910 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
ABCA3-205ENST00000567910 NECTIN2Q92692 538 aa13.82□□□□□ -0.2
ABCA3-205ENST00000567910 CDCA7LQ96GN5 454 aa13.82□□□□□ -0.2
ABCA3-205ENST00000567910 NUP98P52948 1817 aa13.82□□□□□ -0.2
ABCA3-205ENST00000567910 FANCIQ9NVI1 1328 aa13.82□□□□□ -0.2
ABCA3-205ENST00000567910 ZPR1O75312 459 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms