RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 SCHIP1Q9P0W5 487 aaPredicted RBP5.04□□□□□ -1.6
CHD9-204ENST00000561869 CNTNAP5Q8WYK1 1306 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 H7C1W4 665 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 PLA2G4AP47712 749 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 ATP1A2P50993 1020 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 MAP3K10Q02779 954 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 PSME1Q06323 249 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 TNS4Q8IZW8 715 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 ZDHHC1Q8WTX9 485 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 NIFKQ9BYG3 293 aaKnown RBP5.03□□□□□ -1.6
CHD9-204ENST00000561869 GPAMQ9HCL2 828 aa5.03□□□□□ -1.6
CHD9-204ENST00000561869 M0R2N6 131 aa5.02□□□□□ -1.61
CHD9-204ENST00000561869 ATP4AP20648 1035 aa5.02□□□□□ -1.61
CHD9-204ENST00000561869 GTF2E1P29083 439 aaPredicted RBP5.02□□□□□ -1.61
CHD9-204ENST00000561869 LMOD1P29536 600 aaPredicted RBP5.02□□□□□ -1.61
CHD9-204ENST00000561869 PTK7Q13308 1070 aa5.02□□□□□ -1.61
CHD9-204ENST00000561869 CRTC2Q53ET0 693 aaPredicted RBP5.02□□□□□ -1.61
CHD9-204ENST00000561869 NUCKS1Q9H1E3 243 aaKnown RBP5.02□□□□□ -1.61
CHD9-204ENST00000561869 CRISPLD1Q9H336 500 aa5.02□□□□□ -1.61
CHD9-204ENST00000561869 RUBCNLQ9H714 662 aa5.02□□□□□ -1.61
CHD9-204ENST00000561869 SFI1A8K8P3 1242 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 BCRP11274 1271 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 RASA1P20936 1047 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 SRPK2P78362 688 aaKnown RBP5.01□□□□□ -1.61
CHD9-204ENST00000561869 LBRQ14739 615 aaKnown RBP5.01□□□□□ -1.61
CHD9-204ENST00000561869 TEAD4Q15561 434 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 TBCELQ5QJ74 424 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 POTEAQ6S8J7 498 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 SLC9A9Q8IVB4 645 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 C7orf43Q8WVR3 580 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 ZNF594Q96JF6 807 aaPredicted RBP5.01□□□□□ -1.61
CHD9-204ENST00000561869 DCAF5Q96JK2 942 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 NDFIP2Q9NV92 336 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 PARP3Q9Y6F1 533 aa5.01□□□□□ -1.61
CHD9-204ENST00000561869 C21orf2O43822 256 aa5□□□□□ -1.61
CHD9-204ENST00000561869 IGHA1P01876 353 aa5□□□□□ -1.61
CHD9-204ENST00000561869 TXLNAP40222 546 aa5□□□□□ -1.61
CHD9-204ENST00000561869 PLA2G4EQ3MJ16 856 aa5□□□□□ -1.61
CHD9-204ENST00000561869 SH3PXD2AQ5TCZ1 1133 aa5□□□□□ -1.61
CHD9-204ENST00000561869 FOXR1Q6PIV2 292 aa5□□□□□ -1.61
CHD9-204ENST00000561869 TSEN2Q8NCE0 465 aaKnown RBP5□□□□□ -1.61
CHD9-204ENST00000561869 C1orf216Q8TAB5 229 aa5□□□□□ -1.61
CHD9-204ENST00000561869 ARXQ96QS3 562 aa5□□□□□ -1.61
CHD9-204ENST00000561869 VRTNQ9H8Y1 702 aa5□□□□□ -1.61
CHD9-204ENST00000561869 ZDHHC3Q9NYG2 299 aa5□□□□□ -1.61
CHD9-204ENST00000561869 CABP1Q9NZU7 370 aa5□□□□□ -1.61
CHD9-204ENST00000561869 HCN2Q9UL51 889 aa5□□□□□ -1.61
CHD9-204ENST00000561869 FAM196BA6NMK8 535 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 EML1O00423 815 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 MX2P20592 715 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 NOS2P35228 1153 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 C1orf229Q6ZS94 237 aaPredicted RBP4.99□□□□□ -1.61
CHD9-204ENST00000561869 L3MBTL2Q969R5 705 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 AIDAQ96BJ3 306 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 KLRG1Q96E93 195 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 ZIC5Q96T25 663 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 CFHR5Q9BXR6 569 aa4.99□□□□□ -1.61
CHD9-204ENST00000561869 TSPAN10Q9H1Z9 355 aaPredicted RBP4.99□□□□□ -1.61
CHD9-204ENST00000561869 A0A1W2PNR3 127 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 SHISA8B8ZZ34 492 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L15C9J2P7 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L10C9JJH3 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L13C9JLJ4 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L12C9JPN9 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L11C9JVI0 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L21D6R901 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L18D6R9N7 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L22D6RA61 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L17D6RBQ6 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L19D6RCP7 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L20D6RJB6 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 OIP5O43482 229 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 BNIP3LO60238 219 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 SEC13P55735 322 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 SNRPNP63162 240 aaKnown RBP4.98□□□□□ -1.61
CHD9-204ENST00000561869 USP17L24Q0WX57 530 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 DPYDQ12882 1025 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 CDCA8Q53HL2 280 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 LARP1Q6PKG0 1096 aaKnown RBP4.98□□□□□ -1.61
CHD9-204ENST00000561869 ANKMY2Q8IV38 441 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 NEDD1Q8NHV4 660 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 TRERF1Q96PN7 1200 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 SPOCK3Q9BQ16 436 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 ZCCHC2Q9C0B9 1178 aaKnown RBP4.98□□□□□ -1.61
CHD9-204ENST00000561869 ENAMQ9NRM1 1142 aa4.98□□□□□ -1.61
CHD9-204ENST00000561869 SERTM1A2A2V5 107 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 PHF20L1A8MW92 1017 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 PROCP04070 461 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 CSB-PGBD3P0DP91 1061 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 RFX1P22670 979 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 HIRAP54198 1017 aaPredicted RBP4.97□□□□□ -1.61
CHD9-204ENST00000561869 PSMA6P60900 246 aaKnown RBP4.97□□□□□ -1.61
CHD9-204ENST00000561869 NBPF1Q3BBV0 1214 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 EFHC2Q5JST6 749 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 NLRP8Q86W28 1048 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 PGBD3Q8N328 593 aa4.97□□□□□ -1.61
CHD9-204ENST00000561869 BEND7Q8N7W2 519 aaPredicted RBP4.97□□□□□ -1.61
CHD9-204ENST00000561869 ATAD2Q6PL18 1390 aa4.96□□□□□ -1.62
CHD9-204ENST00000561869 ARID3CA6NKF2 412 aa4.96□□□□□ -1.62
CHD9-204ENST00000561869 C2CD2LO14523 706 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms