RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 NR5A1Q13285 461 aa8.43□□□□□ -1.06
CPSF6-206ENST00000550987 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
CPSF6-206ENST00000550987 KIF21BO75037 1637 aa8.43□□□□□ -1.06
CPSF6-206ENST00000550987 WASLO00401 505 aaPredicted RBP8.42□□□□□ -1.06
CPSF6-206ENST00000550987 ADH1CP00326 375 aa8.42□□□□□ -1.06
CPSF6-206ENST00000550987 ARHGAP4P98171 946 aa8.42□□□□□ -1.06
CPSF6-206ENST00000550987 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
CPSF6-206ENST00000550987 C16orf46Q6P387 395 aa8.42□□□□□ -1.06
CPSF6-206ENST00000550987 KIAA1522Q9P206 1035 aaPredicted RBP8.42□□□□□ -1.06
CPSF6-206ENST00000550987 BRPF3Q9ULD4 1205 aa8.42□□□□□ -1.06
CPSF6-206ENST00000550987 ADAMTSL3P82987 1691 aa8.41□□□□□ -1.06
CPSF6-206ENST00000550987 A6NJY4 79 aa8.41□□□□□ -1.06
CPSF6-206ENST00000550987 NDUFB5O43674 189 aa8.41□□□□□ -1.06
CPSF6-206ENST00000550987 SMTNP53814 917 aa8.41□□□□□ -1.06
CPSF6-206ENST00000550987 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
CPSF6-206ENST00000550987 MPNDQ8N594 471 aa8.41□□□□□ -1.06
CPSF6-206ENST00000550987 SLC4A9Q96Q91 983 aa8.41□□□□□ -1.06
CPSF6-206ENST00000550987 PTPRTO14522 1441 aa8.4□□□□□ -1.06
CPSF6-206ENST00000550987 A0A1W2PRU2 124 aa8.4□□□□□ -1.06
CPSF6-206ENST00000550987 ECM1Q16610 540 aa8.4□□□□□ -1.06
CPSF6-206ENST00000550987 ALKBH2Q6NS38 261 aa8.4□□□□□ -1.06
CPSF6-206ENST00000550987 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.06
CPSF6-206ENST00000550987 RAB6BQ9NRW1 208 aa8.4□□□□□ -1.06
CPSF6-206ENST00000550987 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
CPSF6-206ENST00000550987 EMILIN1Q9Y6C2 1016 aa8.4□□□□□ -1.06
CPSF6-206ENST00000550987 AQRO60306 1485 aaKnown RBP eCLIP8.39□□□□□ -1.072e-6■■■□□ 17.8
CPSF6-206ENST00000550987 LILRA1O75019 489 aa8.39□□□□□ -1.07
CPSF6-206ENST00000550987 MPSTP25325 297 aa8.39□□□□□ -1.07
CPSF6-206ENST00000550987 ADD1P35611 737 aaKnown RBP8.39□□□□□ -1.07
CPSF6-206ENST00000550987 ARHGEF10LQ9HCE6 1279 aa8.39□□□□□ -1.07
CPSF6-206ENST00000550987 USP35Q9P2H5 1018 aa8.39□□□□□ -1.07
CPSF6-206ENST00000550987 RGS17Q9UGC6 210 aaPredicted RBP8.39□□□□□ -1.07
CPSF6-206ENST00000550987 LIAT1Q6ZQX7 453 aa8.38□□□□□ -1.07
CPSF6-206ENST00000550987 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
CPSF6-206ENST00000550987 SAP130Q9H0E3 1048 aa8.38□□□□□ -1.07
CPSF6-206ENST00000550987 STIM2Q9P246 746 aa8.38□□□□□ -1.07
CPSF6-206ENST00000550987 SIAH2O43255 324 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 NPR3P17342 541 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 HSPA1LP34931 641 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 EPHA4P54764 986 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 PSMA6P60900 246 aaKnown RBP8.37□□□□□ -1.07
CPSF6-206ENST00000550987 COL19A1Q14993 1142 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 TLR1Q15399 786 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 POTEGQ6S5H5 508 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 XAGE2Q96GT9 111 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 MRGPRX2Q96LB1 330 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 C2orf49Q9BVC5 232 aaPredicted RBP8.37□□□□□ -1.07
CPSF6-206ENST00000550987 ZNF232Q9UNY5 417 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
CPSF6-206ENST00000550987 WNT7AO00755 349 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 CDK2AP1O14519 115 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 IGSF3O75054 1194 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 ALDH1A1P00352 501 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
CPSF6-206ENST00000550987 SLC19A1P41440 591 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 PLCB3Q01970 1234 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 TAGLNQ01995 201 aaKnown RBP8.36□□□□□ -1.07
CPSF6-206ENST00000550987 STAG2Q8N3U4 1231 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 NLRP3Q96P20 1036 aa8.36□□□□□ -1.07
CPSF6-206ENST00000550987 SERTM1A2A2V5 107 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 NR3C2P08235 984 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 TCF3P15923 654 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 EIF1AXP47813 144 aaKnown RBP8.35□□□□□ -1.07
CPSF6-206ENST00000550987 FOXK2Q01167 660 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 COX20Q5RI15 118 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 TMC7Q7Z402 723 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 FBXO33Q7Z6M2 555 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 RNF166Q96A37 237 aaPredicted RBP8.35□□□□□ -1.07
CPSF6-206ENST00000550987 CITED4Q96RK1 184 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 RBCK1Q9BYM8 510 aa8.35□□□□□ -1.07
CPSF6-206ENST00000550987 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.07
CPSF6-206ENST00000550987 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
CPSF6-206ENST00000550987 MTFR1Q15390 333 aa8.34□□□□□ -1.07
CPSF6-206ENST00000550987 NBPF15Q8N660 670 aa8.34□□□□□ -1.07
CPSF6-206ENST00000550987 ABTB2Q8N961 1025 aa8.34□□□□□ -1.07
CPSF6-206ENST00000550987 ESYT1Q9BSJ8 1104 aa8.34□□□□□ -1.07
CPSF6-206ENST00000550987 CABP1Q9NZU7 370 aa8.34□□□□□ -1.07
CPSF6-206ENST00000550987 STRCQ7RTU9 1775 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 SENP3-EIF4A1A0A087X0R7 540 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 MEN1O00255 615 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 IL2RAP01589 272 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 FGD1P98174 961 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 PDE3BQ13370 1112 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
CPSF6-206ENST00000550987 ADH1AP07327 375 aa8.32□□□□□ -1.08
CPSF6-206ENST00000550987 MAPK8P45983 427 aa8.32□□□□□ -1.08
CPSF6-206ENST00000550987 XPCQ01831 940 aaPredicted RBP8.32□□□□□ -1.08
CPSF6-206ENST00000550987 FOXC1Q12948 553 aa8.32□□□□□ -1.08
CPSF6-206ENST00000550987 NNTQ13423 1086 aa8.32□□□□□ -1.08
CPSF6-206ENST00000550987 TTC16Q8NEE8 873 aa8.32□□□□□ -1.08
CPSF6-206ENST00000550987 IGSF5Q9NSI5 407 aa8.32□□□□□ -1.08
CPSF6-206ENST00000550987 MADDQ8WXG6 1647 aa8.32□□□□□ -1.08
CPSF6-206ENST00000550987 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
CPSF6-206ENST00000550987 VAMP1P23763 118 aa8.31□□□□□ -1.08
CPSF6-206ENST00000550987 NOS2P35228 1153 aa8.31□□□□□ -1.08
CPSF6-206ENST00000550987 CENPCQ03188 943 aa8.31□□□□□ -1.08
CPSF6-206ENST00000550987 CBLBQ13191 982 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms