RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ERVK-9P63128 1117 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 NAA30Q147X3 362 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-204ENST00000539097 ABTB2Q8N961 1025 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 LRFN2Q9ULH4 789 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 RNF223E7ERA6 249 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 RPS26P11Q5JNZ5 115 aaPredicted RBP1.78□□□□□ -2.12
HIF1A-204ENST00000539097 ZNF787Q6DD87 383 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 ATCAYQ86WG3 371 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 NPAS4Q8IUM7 802 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 CCDC24Q8N4L8 307 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 ZNF511Q8NB15 262 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 TPCN2Q8NHX9 752 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 ANKIB1Q9P2G1 1089 aa1.78□□□□□ -2.12
HIF1A-204ENST00000539097 FAM181BA6NEQ2 426 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 WNT7AO00755 349 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 RLBP1P12271 317 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 ST13P50502 369 aaKnown RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 RNF144AP50876 292 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 OXLD1Q5BKU9 147 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 CCDC84Q86UT8 332 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 CUEDC1Q9NWM3 386 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 PGPEP1Q9NXJ5 209 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 PCDHB9Q9Y5E1 797 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 ROBO2Q9HCK4 1378 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 A0A1W2PRU2 124 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 KCNQ4P56696 695 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 ANKMY2Q8IV38 441 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 FAM200AQ8TCP9 573 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 OSBPL3Q9H4L5 887 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 XRCC5P13010 732 aaKnown RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 ZNF16P17020 682 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 CTC1Q2NKJ3 1217 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 NBPF20Q3BBV1 942 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 LCE3BQ5TA77 95 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 NBPF6Q5VWK0 638 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 ALYREFQ86V81 257 aaKnown RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 NBPF4Q96M43 638 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 ASB16Q96NS5 453 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 PSMG3-AS1Q96PY0 264 aa1.77□□□□□ -2.13
HIF1A-204ENST00000539097 TSPAN10Q9H1Z9 355 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 SRA1Q9HD15 236 aaKnown RBP1.77□□□□□ -2.13
HIF1A-204ENST00000539097 SOWAHDA6NJG2 315 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 ERVH48-1M5A8F1 160 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 LILRA1O75019 489 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 CD2BP2O95400 341 aaKnown RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 RECKO95980 971 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 PDE3BQ13370 1112 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 CCDC27Q2M243 656 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 INTS6LQ5JSJ4 861 aaKnown RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 TNS4Q8IZW8 715 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 GMLQ99445 158 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 CXXC1Q9P0U4 656 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 A6NHS1 94 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 MYCP01106 439 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 PCSK7Q16549 785 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 ZC3H12BQ5HYM0 836 aaKnown RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 CCDC102BQ68D86 513 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 Q6ZVU0 165 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 FBXO33Q7Z6M2 555 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 SLC51AQ86UW1 340 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 ZNF784Q8NCA9 323 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 ETNK1Q9HBU6 452 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 WWC3Q9ULE0 1092 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 H3BRB1 525 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 AVPP01185 164 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 HMGB1P09429 215 aaKnown RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 ATP2B4P23634 1241 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 GRNP28799 593 aaKnown RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 SEC13P55735 322 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 GTF2IP78347 998 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 TRIM32Q13049 653 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 C9orf131Q5VYM1 1079 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 LIAT1Q6ZQX7 453 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 TRIM67Q6ZTA4 783 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 ZSCAN29Q8IWY8 852 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 RGL4Q8IZJ4 473 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 PRKD2Q9BZL6 878 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 TUT1Q9H6E5 874 aaKnown RBP1.76□□□□□ -2.13
HIF1A-204ENST00000539097 CCDC87Q9NVE4 849 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 PARP3Q9Y6F1 533 aa1.76□□□□□ -2.13
HIF1A-204ENST00000539097 GOLGA8CPA6NN73 597 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 SLFNL1Q499Z3 407 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 FAM182BQ5T319 152 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 ALG1LQ6GMV1 187 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 OR6P1Q8NGX9 317 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 GTF3C2Q8WUA4 911 aaPredicted RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 FAM129BQ96TA1 746 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 ARHGAP9Q9BRR9 750 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 SLC6A16Q9GZN6 736 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 DNAAF2Q9NVR5 837 aaKnown RBP1.75□□□□□ -2.13
HIF1A-204ENST00000539097 BCS1LQ9Y276 419 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 USP20Q9Y2K6 914 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 ANKRD33BA6NCL7 494 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 TNFRSF10BO14763 440 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 GPR182O15218 404 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 SIAH2O43255 324 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 ICMTO60725 284 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 ABL1P00519 1130 aa1.75□□□□□ -2.13
HIF1A-204ENST00000539097 FSHRP23945 695 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms