RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 TEAD4Q15561 434 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 SVOPQ8N4V2 548 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 RUBCNLQ9H714 662 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 LRRC4BQ9NT99 713 aa8.02□□□□□ -1.13
ITGB1-219ENST00000534049 GPR25O00155 361 aa8.01□□□□□ -1.13
ITGB1-219ENST00000534049 ATP4AP20648 1035 aa8.01□□□□□ -1.13
ITGB1-219ENST00000534049 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
ITGB1-219ENST00000534049 SLC9A9Q8IVB4 645 aa8.01□□□□□ -1.13
ITGB1-219ENST00000534049 ENAMQ9NRM1 1142 aa8.01□□□□□ -1.13
ITGB1-219ENST00000534049 IGF1RP08069 1367 aa8□□□□□ -1.13
ITGB1-219ENST00000534049 FAM196BA6NMK8 535 aa8□□□□□ -1.13
ITGB1-219ENST00000534049 RNF225M0QZC1 329 aaPredicted RBP8□□□□□ -1.13
ITGB1-219ENST00000534049 SEC13P55735 322 aa8□□□□□ -1.13
ITGB1-219ENST00000534049 ARSJQ5FYB0 599 aaPredicted RBP8□□□□□ -1.13
ITGB1-219ENST00000534049 GAS2L2Q8NHY3 880 aa8□□□□□ -1.13
ITGB1-219ENST00000534049 ZNF594Q96JF6 807 aaPredicted RBP8□□□□□ -1.13
ITGB1-219ENST00000534049 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
ITGB1-219ENST00000534049 KIAA1024Q9UPX6 916 aa8□□□□□ -1.13
ITGB1-219ENST00000534049 SERTM1A2A2V5 107 aa7.99□□□□□ -1.13
ITGB1-219ENST00000534049 LMOD1P29536 600 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-219ENST00000534049 HIRAP54198 1017 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-219ENST00000534049 ZNF385CQ66K41 422 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-219ENST00000534049 ZMYND15Q9H091 742 aa7.99□□□□□ -1.13
ITGB1-219ENST00000534049 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
ITGB1-219ENST00000534049 PCDHGC4Q9Y5F7 938 aa7.99□□□□□ -1.13
ITGB1-219ENST00000534049 GTF3C3Q9Y5Q9 886 aa7.99□□□□□ -1.13
ITGB1-219ENST00000534049 GJA3Q9Y6H8 435 aa7.99□□□□□ -1.13
ITGB1-219ENST00000534049 NOS2P35228 1153 aa7.98□□□□□ -1.13
ITGB1-219ENST00000534049 BICDL1Q6ZP65 573 aa7.98□□□□□ -1.13
ITGB1-219ENST00000534049 TNS4Q8IZW8 715 aa7.98□□□□□ -1.13
ITGB1-219ENST00000534049 L3MBTL2Q969R5 705 aa7.98□□□□□ -1.13
ITGB1-219ENST00000534049 ZNF232Q9UNY5 417 aa7.98□□□□□ -1.13
ITGB1-219ENST00000534049 A0A1W2PNR3 127 aa7.97□□□□□ -1.13
ITGB1-219ENST00000534049 THBS1P07996 1170 aa7.97□□□□□ -1.13
ITGB1-219ENST00000534049 PTK7Q13308 1070 aa7.97□□□□□ -1.13
ITGB1-219ENST00000534049 UBAP2LQ14157 1087 aaKnown RBP7.97□□□□□ -1.13
ITGB1-219ENST00000534049 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
ITGB1-219ENST00000534049 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
ITGB1-219ENST00000534049 C1orf53Q5VUE5 145 aa7.97□□□□□ -1.13
ITGB1-219ENST00000534049 STAG2Q8N3U4 1231 aa7.97□□□□□ -1.13
ITGB1-219ENST00000534049 USP3Q9Y6I4 520 aa7.97□□□□□ -1.13
ITGB1-219ENST00000534049 USP17L15C9J2P7 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L10C9JJH3 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L13C9JLJ4 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L12C9JPN9 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L11C9JVI0 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L21D6R901 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L18D6R9N7 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L22D6RA61 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L17D6RBQ6 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L19D6RCP7 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L20D6RJB6 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 ATXN7O15265 892 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-219ENST00000534049 FGFR3P22607 806 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 USP17L24Q0WX57 530 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 HIF1AQ16665 826 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 POTEAQ6S8J7 498 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 ZCCHC2Q9C0B9 1178 aaKnown RBP7.96□□□□□ -1.14
ITGB1-219ENST00000534049 NEUROD4Q9HD90 331 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 NDFIP2Q9NV92 336 aa7.96□□□□□ -1.14
ITGB1-219ENST00000534049 GDF2Q9UK05 429 aaPredicted RBP7.96□□□□□ -1.14
ITGB1-219ENST00000534049 EML1O00423 815 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 DKK1O94907 266 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 CELA2BP08218 269 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-219ENST00000534049 FAM157BP0CG42 384 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 BCRP11274 1271 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 LAMC2Q13753 1193 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 ANKMY2Q8IV38 441 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 ZDHHC1Q8WTX9 485 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 ZIC5Q96T25 663 aa7.95□□□□□ -1.14
ITGB1-219ENST00000534049 OXCT2Q9BYC2 517 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-219ENST00000534049 TSPAN10Q9H1Z9 355 aaPredicted RBP7.95□□□□□ -1.14
ITGB1-219ENST00000534049 SFI1A8K8P3 1242 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 PPP1R12BO60237 982 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-219ENST00000534049 BNIP3LO60238 219 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 ARHGEF15O94989 841 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 BMP4P12644 408 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 CRTC2Q53ET0 693 aaPredicted RBP7.94□□□□□ -1.14
ITGB1-219ENST00000534049 CFAP70Q5T0N1 1121 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 FAM182BQ5T319 152 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 GOLGA6L1Q8N7Z2 621 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 TSEN2Q8NCE0 465 aaKnown RBP7.94□□□□□ -1.14
ITGB1-219ENST00000534049 ABHD17AQ96GS6 310 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 ANKIB1Q9P2G1 1089 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 ADAMTS8Q9UP79 889 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 PARP3Q9Y6F1 533 aa7.94□□□□□ -1.14
ITGB1-219ENST00000534049 MARSP56192 900 aaKnown RBP7.93□□□□□ -1.14
ITGB1-219ENST00000534049 DPYDQ12882 1025 aa7.93□□□□□ -1.14
ITGB1-219ENST00000534049 LYPD4Q6UWN0 246 aa7.93□□□□□ -1.14
ITGB1-219ENST00000534049 WHAMMQ8TF30 809 aa7.93□□□□□ -1.14
ITGB1-219ENST00000534049 SCARF2Q96GP6 870 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-219ENST00000534049 AVENQ9NQS1 362 aaPredicted RBP7.93□□□□□ -1.14
ITGB1-219ENST00000534049 TXLNAP40222 546 aa7.92□□□□□ -1.14
ITGB1-219ENST00000534049 RHPN1Q8TCX5 695 aa7.92□□□□□ -1.14
ITGB1-219ENST00000534049 ACDQ96AP0 544 aa7.92□□□□□ -1.14
ITGB1-219ENST00000534049 HINFPQ9BQA5 517 aa7.92□□□□□ -1.14
ITGB1-219ENST00000534049 OIP5O43482 229 aa7.91□□□□□ -1.14
ITGB1-219ENST00000534049 ARAFP10398 606 aa7.91□□□□□ -1.14
ITGB1-219ENST00000534049 MAPTP10636 758 aaKnown RBP7.91□□□□□ -1.14
ITGB1-219ENST00000534049 RFX1P22670 979 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms