RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 RAB3IPQ96QF0 476 aaPredicted RBP9.36□□□□□ -0.91
CTNND1-231ENST00000532463 WHAMMP3Q1A5X7 153 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 TSNAXIP1Q2TAA8 658 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 PPP4R3AQ6IN85 833 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 SYCE3A1L190 88 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 SAMD15Q9P1V8 674 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 MAP3K7CLP57077 242 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 NEDD9Q14511 834 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 FMNL3Q8IVF7 1028 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.36□□□□□ -0.915e-6■■■□□ 17.3
CTNND1-231ENST00000532463 RASAL2Q9UJF2 1139 aa9.36□□□□□ -0.91
CTNND1-231ENST00000532463 EVA1CP58658 441 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 ATP2B2Q01814 1243 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 SPTY2D1Q68D10 685 aaPredicted RBP9.35□□□□□ -0.91
CTNND1-231ENST00000532463 CPLX4Q7Z7G2 160 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 ATP2A1O14983 1001 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 DIAPH1O60610 1272 aaKnown RBP9.35□□□□□ -0.91
CTNND1-231ENST00000532463 CEP128Q6ZU80 1094 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 PANK3Q9H999 370 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 JADE2Q9NQC1 790 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 TRMT1Q9NXH9 659 aaKnown RBP9.35□□□□□ -0.91
CTNND1-231ENST00000532463 APAF1O14727 1248 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 ZNF365Q70YC5 407 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC50Q8IVM0 306 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 GNL3LQ9NVN8 582 aaKnown RBP9.35□□□□□ -0.91
CTNND1-231ENST00000532463 ST20-MTHFSA0A0A6YYL1 179 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 TRIM7Q9C029 511 aa9.35□□□□□ -0.91
CTNND1-231ENST00000532463 CTAGE5O15320 804 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 TNIP1Q15025 636 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC183Q5T5S1 534 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC63Q8NA47 563 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 NUP155O75694 1391 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 SURF6O75683 361 aaKnown RBP9.34□□□□□ -0.91
CTNND1-231ENST00000532463 RIPK4P57078 832 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 AP1ARQ63HQ0 302 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 GGT6Q6P531 493 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 DACT3Q96B18 629 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-231ENST00000532463 DHX57Q6P158 1386 aaKnown RBP9.34□□□□□ -0.91
CTNND1-231ENST00000532463 BICDL2A1A5D9 508 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 GBP1P32455 592 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 NOP2P46087 812 aaKnown RBP9.34□□□□□ -0.91
CTNND1-231ENST00000532463 ERCC6LQ2NKX8 1250 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 AEBP2Q6ZN18 517 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-231ENST00000532463 RUFY3Q7L099 469 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC38Q502W7 563 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC144CPQ8IYA2 1237 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC12Q8WUD4 166 aaPredicted RBP9.34□□□□□ -0.91
CTNND1-231ENST00000532463 ODF2LQ9ULJ1 636 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CTAGE15A4D2H0 777 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 SH3BP5O60239 455 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CTAGE8P0CG41 777 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 DIXDC1Q155Q3 683 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CCDC14Q49A88 953 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 BLOC1S2Q6QNY1 142 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 CTAGE4Q8IX94 777 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 EPSTI1Q96J88 318 aa9.34□□□□□ -0.91
CTNND1-231ENST00000532463 GCC1Q96CN9 775 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 SPAG5Q96R06 1193 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 VCX3AQ9NNX9 186 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 TACC3Q9Y6A5 838 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-231ENST00000532463 PRPF31Q8WWY3 499 aaKnown RBP9.33□□□□□ -0.92
CTNND1-231ENST00000532463 CHMP2AO43633 222 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 TUBB4BP68371 445 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 CFAP157Q5JU67 520 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 INTS8Q75QN2 995 aaKnown RBP9.33□□□□□ -0.92
CTNND1-231ENST00000532463 PHLDB2Q86SQ0 1253 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 NCAPGQ9BPX3 1015 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 PHAXQ9H814 394 aaKnown RBP9.33□□□□□ -0.92
CTNND1-231ENST00000532463 KRT32Q14532 448 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 NUTM2DQ5VT03 806 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-231ENST00000532463 ZSCAN25Q6NSZ9 544 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 RGS22Q8NE09 1264 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 TSPYL4Q9UJ04 414 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 EID1Q9Y6B2 187 aa9.33□□□□□ -0.92
CTNND1-231ENST00000532463 GNG11P61952 73 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 SELENOSQ9BQE4 189 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 TRIM35Q9UPQ4 493 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 MCM6Q14566 821 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 TTC39AQ5SRH9 613 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 LRRC43Q8N309 656 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-231ENST00000532463 TTC12Q9H892 705 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-231ENST00000532463 BUB1BO60566 1050 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-231ENST00000532463 SEC62Q99442 399 aaKnown RBP9.32□□□□□ -0.92
CTNND1-231ENST00000532463 PDRG1Q9NUG6 133 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 CTNNA3Q9UI47 895 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 PRPHP41219 470 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 CAMK4Q16566 473 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 POTEDQ86YR6 584 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 CPLX3Q8WVH0 158 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 UBAC1Q9BSL1 405 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 SELENOOQ9BVL4 669 aa9.32□□□□□ -0.92
CTNND1-231ENST00000532463 TMX1Q9H3N1 280 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms