RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 NRDCO43847 1150 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 GBP2P32456 591 aaPredicted RBP10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 NUP133Q8WUM0 1156 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 NCOA1Q15788 1441 aa10.36□□□□□ -0.75
CAPRIN1-209ENST00000530820 KINO60870 393 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 MBD3O95983 291 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 RNF187Q5TA31 235 aaPredicted RBP10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 PAXBP1Q9Y5B6 917 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 TMTC2Q8N394 836 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 FOSBP53539 338 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 KCNB2Q92953 911 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 ITFG2Q969R8 447 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 ERO1AQ96HE7 468 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 YIPF2Q9BWQ6 316 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 SPATS2LQ9NUQ6 558 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 PLEKHG2Q9H7P9 1386 aa10.35□□□□□ -0.75
CAPRIN1-209ENST00000530820 CCDC196A0A1B0GTZ2 297 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 HMMRO75330 724 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 MUM1L1Q5H9M0 696 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 JAKMIP3Q5VZ66 844 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 MICAL1Q8TDZ2 1067 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 TBC1D31Q96DN5 1066 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 GOLGA8FQ08AF8 430 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 GOLGA8DPQ0D2H9 430 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 C1QTNF12Q5T7M4 302 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 CLIC6Q96NY7 704 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 GNL3LQ9NVN8 582 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 ERICH3Q5RHP9 1530 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.754e-7■■■■■ 29.8
CAPRIN1-209ENST00000530820 hCG_2014768A0A024R1R8 64 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 PPFIA3O75145 1194 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 GSCP56915 257 aaPredicted RBP10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 EVCP57679 992 aa10.34□□□□□ -0.75
CAPRIN1-209ENST00000530820 KCNA4P22459 653 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 TMEM62Q0P6H9 643 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 ARHGAP27Q6ZUM4 889 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 CREBRFQ8IUR6 639 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 MPHOSPH9Q99550 1183 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 GNPTABQ3T906 1256 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 C3orf20Q8ND61 904 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 USP47Q96K76 1375 aa10.33□□□□□ -0.76
CAPRIN1-209ENST00000530820 ELL2O00472 640 aaPredicted RBP10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 SLFN5Q08AF3 891 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 SNW1Q13573 536 aaKnown RBP10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 TMC6Q7Z403 805 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 SENP3Q9H4L4 574 aaPredicted RBP10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 PUF60Q9UHX1 559 aaKnown RBP10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 DYTNA2CJ06 578 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 VPS37CA5D8V6 355 aaPredicted RBP10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 C14orf80Q86SX3 495 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 SNX21Q969T3 373 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 KCNB1Q14721 858 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 HHATQ5VTY9 493 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 USHBP1Q8N6Y0 703 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 CNNM3Q8NE01 707 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 DNAJC25Q9H1X3 360 aa10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 SETD1BQ9UPS6 1966 aaKnown RBP10.32□□□□□ -0.76
CAPRIN1-209ENST00000530820 RTEL1-TNFRSF6BF6WH68 1400 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 MYOM3Q5VTT5 1437 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 RRBP1Q9P2E9 1410 aaKnown RBP10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 KLHL33A6NCF5 533 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 ABCD1P33897 745 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 ANO6Q4KMQ2 910 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 HSP90AA4PQ58FG1 418 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 TSHZ3Q63HK5 1081 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 KCNV1Q6PIU1 500 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 C16orf71Q8IYS4 520 aaPredicted RBP10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 TSR2Q969E8 191 aaKnown RBP10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 SPAG9O60271 1321 aaKnown RBP10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 RHOXF2BP0C7M4 288 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 MAEAQ7L5Y9 396 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 RHOXF2Q9BQY4 288 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 SMARCA2P51531 1590 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 KIF15Q9NS87 1388 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 ZKSCAN8Q15776 578 aaPredicted RBP10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 HSP90B2PQ58FF3 399 aa10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 SUDS3Q9H7L9 328 aaPredicted RBP10.31□□□□□ -0.76
CAPRIN1-209ENST00000530820 CCDC69A6NI79 296 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 ST18O60284 1047 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 TFRCP02786 760 aaKnown RBP10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 MAGEA10P43363 369 aaPredicted RBP10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 CORO7P57737 925 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 LMBRD2Q68DH5 695 aaPredicted RBP10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 HOOK3Q86VS8 718 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 ZNF483Q8TF39 744 aaPredicted RBP10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 ARFGAP3Q9NP61 516 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 KIF21BO75037 1637 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 IVLP07476 585 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 NEDD9Q14511 834 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 TFIP11Q9UBB9 837 aaKnown RBP10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 NBPF7P0C2Y1 421 aaPredicted RBP10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 CCDC183Q5T5S1 534 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 TEX11Q8IYF3 940 aa10.3□□□□□ -0.76
CAPRIN1-209ENST00000530820 ZSCAN16Q9H4T2 348 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms