RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CAMK4Q16566 473 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 RPGRQ92834 1020 aaKnown RBP9.89□□□□□ -0.83
CTNND1-227ENST00000530748 AMOTL2Q9Y2J4 779 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 UQCRHP07919 91 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 TTF1Q15361 905 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-227ENST00000530748 LRRFIP2Q9Y608 721 aaKnown RBP9.89□□□□□ -0.83
CTNND1-227ENST00000530748 SLC12A7Q9Y666 1083 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 ADGRF5Q8IZF2 1346 aa9.89□□□□□ -0.83
CTNND1-227ENST00000530748 MINDY4BA8MYZ0 360 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 FAM177A1Q8N128 213 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-227ENST00000530748 CUL5Q93034 780 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 EVI5LQ96CN4 794 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 DUOX2Q9NRD8 1548 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 ENOX2Q16206 610 aaKnown RBP9.88□□□□□ -0.83
CTNND1-227ENST00000530748 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 TSPYL1Q9H0U9 437 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 RNF41Q9H4P4 317 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-227ENST00000530748 RALGAPBQ86X10 1494 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 ZNF213O14771 459 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 ANO10Q9NW15 660 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
CTNND1-227ENST00000530748 CTTNBP2Q8WZ74 1663 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 FKBP15Q5T1M5 1219 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 RPRD2Q5VT52 1461 aaKnown RBP9.88□□□□□ -0.83
CTNND1-227ENST00000530748 MPRIPQ6WCQ1 1025 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 PIK3R4Q99570 1358 aa9.88□□□□□ -0.83
CTNND1-227ENST00000530748 DBF4Q9UBU7 674 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-227ENST00000530748 KIAA0754O94854 1291 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 TMEM266Q2M3C6 531 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 TEX13AQ9BXU3 409 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-227ENST00000530748 SYCE3A1L190 88 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
CTNND1-227ENST00000530748 ZNF444Q8N0Y2 327 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-227ENST00000530748 MAP3K2Q9Y2U5 619 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
CTNND1-227ENST00000530748 NEBLO76041 1014 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 CASQ1P31415 396 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 CTCFLQ8NI51 663 aaPredicted RBP9.87□□□□□ -0.83
CTNND1-227ENST00000530748 C8orf76Q96K31 380 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 ANKRD62A6NC57 917 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 GOLGA8AA7E2F4 631 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 GOLGA8BA8MQT2 603 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 FGFR1OPO95684 399 aaKnown RBP9.87□□□□□ -0.83
CTNND1-227ENST00000530748 CFAP100Q494V2 611 aa9.87□□□□□ -0.83
CTNND1-227ENST00000530748 A0A087WZG4 1122 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 SCAND2PQ9GZW5 306 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-227ENST00000530748 CCDC8Q9H0W5 538 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-227ENST00000530748 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 IL16Q14005 1332 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 CTAGE5O15320 804 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 SPA17Q15506 151 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 ZSCAN12O43309 604 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 KDM5BQ9UGL1 1544 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 FAM193AP78312 1265 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 CCDC96Q2M329 555 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 CATIPQ7Z7H3 387 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 IQCA1Q86XH1 822 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 RAB34Q9BZG1 259 aa9.86□□□□□ -0.83
CTNND1-227ENST00000530748 URB2Q14146 1524 aaKnown RBP9.85□□□□□ -0.83
CTNND1-227ENST00000530748 ASXL1Q8IXJ9 1541 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 GOLGA6L7A0A1B0GV03 622 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 F6X3S4 739 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 KRT28Q7Z3Y7 464 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 CWC25Q9NXE8 425 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-227ENST00000530748 KIF2AO00139 706 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-227ENST00000530748 ARHGAP29Q52LW3 1261 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 C14orf93Q9H972 538 aaKnown RBP9.85□□□□□ -0.83
CTNND1-227ENST00000530748 BICRAQ9NZM4 1560 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 RANBP6O60518 1105 aaKnown RBP9.85□□□□□ -0.83
CTNND1-227ENST00000530748 LIMCH1Q9UPQ0 1083 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 CALRP27797 417 aaKnown RBP9.85□□□□□ -0.83
CTNND1-227ENST00000530748 FLIIQ13045 1269 aa9.85□□□□□ -0.83
CTNND1-227ENST00000530748 NLRP5P59047 1200 aa9.84□□□□□ -0.83
CTNND1-227ENST00000530748 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
CTNND1-227ENST00000530748 BAG4O95429 457 aaKnown RBP9.84□□□□□ -0.83
CTNND1-227ENST00000530748 CENPHQ9H3R5 247 aa9.84□□□□□ -0.83
CTNND1-227ENST00000530748 SSR1P43307 286 aaKnown RBP9.84□□□□□ -0.83
CTNND1-227ENST00000530748 C20orf194Q5TEA3 1177 aa9.84□□□□□ -0.83
CTNND1-227ENST00000530748 CCDC150Q8NCX0 1101 aa9.84□□□□□ -0.83
CTNND1-227ENST00000530748 CCDC12Q8WUD4 166 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-227ENST00000530748 EXOC5O00471 708 aa9.84□□□□□ -0.83
CTNND1-227ENST00000530748 IFIT3O14879 490 aaKnown RBP9.84□□□□□ -0.83
CTNND1-227ENST00000530748 KIF20AO95235 890 aa9.84□□□□□ -0.83
CTNND1-227ENST00000530748 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-227ENST00000530748 CETN2P41208 172 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 FILIP1Q7Z7B0 1213 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 GBP3Q9H0R5 595 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 UGGT2Q9NYU1 1516 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 TNRQ92752 1358 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 TRIM27P14373 513 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 MCM3P25205 808 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 GJB2P29033 226 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 PPP1R42Q7Z4L9 355 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 MPNDQ8N594 471 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 TAX1BP1Q86VP1 789 aa9.83□□□□□ -0.84
CTNND1-227ENST00000530748 CDC5LQ99459 802 aaKnown RBP9.83□□□□□ -0.84
CTNND1-227ENST00000530748 PYM1Q9BRP8 204 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms