RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ABHD8Q96I13 439 aa24.43■■□□□ 1.5
PVT1-220ENST00000524165 TJP1Q07157 1748 aa24.42■■□□□ 1.5
PVT1-220ENST00000524165 NFKBIEO00221 500 aa24.42■■□□□ 1.5
PVT1-220ENST00000524165 PPM1GO15355 546 aaPredicted RBP24.41■■□□□ 1.5
PVT1-220ENST00000524165 LBX1P52954 281 aa24.4■■□□□ 1.5
PVT1-220ENST00000524165 WBP1LQ9NX94 342 aa24.4■■□□□ 1.5
PVT1-220ENST00000524165 FER1L6Q2WGJ9 1857 aa24.38■■□□□ 1.49
PVT1-220ENST00000524165 PASKQ96RG2 1323 aa24.38■■□□□ 1.49
PVT1-220ENST00000524165 PTCD1O75127 700 aaKnown RBP24.38■■□□□ 1.49
PVT1-220ENST00000524165 ZPR1O75312 459 aa24.38■■□□□ 1.49
PVT1-220ENST00000524165 VEGFBP49765 207 aa24.38■■□□□ 1.49
PVT1-220ENST00000524165 CABP4P57796 275 aa24.38■■□□□ 1.49
PVT1-220ENST00000524165 MLLT1Q03111 559 aaPredicted RBP24.37■■□□□ 1.49
PVT1-220ENST00000524165 USPL1Q5W0Q7 1092 aa24.36■■□□□ 1.49
PVT1-220ENST00000524165 INTS5Q6P9B9 1019 aaKnown RBP24.36■■□□□ 1.49
PVT1-220ENST00000524165 POTEIP0CG38 1075 aa24.35■■□□□ 1.49
PVT1-220ENST00000524165 POTEJP0CG39 1038 aa24.35■■□□□ 1.49
PVT1-220ENST00000524165 RGS19P49795 217 aa24.35■■□□□ 1.49
PVT1-220ENST00000524165 ERFEQ4G0M1 354 aa24.35■■□□□ 1.49
PVT1-220ENST00000524165 SCN4AP35499 1836 aa24.34■■□□□ 1.49
PVT1-220ENST00000524165 NFIXQ14938 502 aa24.34■■□□□ 1.49
PVT1-220ENST00000524165 C2CD5Q86YS7 1000 aa24.34■■□□□ 1.49
PVT1-220ENST00000524165 TMEM88BA6NKF7 163 aa24.33■■□□□ 1.49
PVT1-220ENST00000524165 H0YIN7 160 aa24.33■■□□□ 1.49
PVT1-220ENST00000524165 HSPA8P11142 646 aaKnown RBP24.32■■□□□ 1.48
PVT1-220ENST00000524165 LDHDQ86WU2 507 aa24.32■■□□□ 1.48
PVT1-220ENST00000524165 SERPINB2P05120 415 aa24.31■■□□□ 1.48
PVT1-220ENST00000524165 PLEKHO1Q53GL0 409 aaPredicted RBP24.3■■□□□ 1.48
PVT1-220ENST00000524165 CARD14Q9BXL6 1004 aa24.3■■□□□ 1.48
PVT1-220ENST00000524165 NARFQ9UHQ1 456 aa24.3■■□□□ 1.48
PVT1-220ENST00000524165 SOS1Q07889 1333 aaPredicted RBP24.3■■□□□ 1.48
PVT1-220ENST00000524165 LTBP3Q9NS15 1303 aa24.3■■□□□ 1.48
PVT1-220ENST00000524165 IQCA1LA6NCM1 817 aa24.29■■□□□ 1.48
PVT1-220ENST00000524165 DDNO94850 711 aaPredicted RBP24.29■■□□□ 1.48
PVT1-220ENST00000524165 EIF4A2Q14240 407 aaKnown RBP24.29■■□□□ 1.48
PVT1-220ENST00000524165 POLKQ9UBT6 870 aa24.29■■□□□ 1.48
PVT1-220ENST00000524165 AMOTQ4VCS5 1084 aa24.28■■□□□ 1.48
PVT1-220ENST00000524165 ZNF530Q6P9A1 599 aaPredicted RBP24.28■■□□□ 1.48
PVT1-220ENST00000524165 NFATC2IPQ8NCF5 419 aa24.28■■□□□ 1.48
PVT1-220ENST00000524165 ANKRD31Q8N7Z5 1873 aa24.28■■□□□ 1.48
PVT1-220ENST00000524165 ITGBL1O95965 494 aaPredicted RBP24.27■■□□□ 1.48
PVT1-220ENST00000524165 MTHFSP49914 203 aa24.27■■□□□ 1.48
PVT1-220ENST00000524165 MAP2K1Q02750 393 aaPredicted RBP24.27■■□□□ 1.48
PVT1-220ENST00000524165 PDZRN3Q9UPQ7 1066 aa24.27■■□□□ 1.48
PVT1-220ENST00000524165 CARMIL3Q8ND23 1372 aa24.27■■□□□ 1.48
PVT1-220ENST00000524165 RASSF10A6NK89 507 aa24.26■■□□□ 1.47
PVT1-220ENST00000524165 CCDC85CA6NKD9 419 aa24.25■■□□□ 1.47
PVT1-220ENST00000524165 C21orf2O43822 256 aa24.25■■□□□ 1.47
PVT1-220ENST00000524165 L3MBTL3Q96JM7 780 aaPredicted RBP24.25■■□□□ 1.47
PVT1-220ENST00000524165 SCN11AQ9UI33 1791 aa24.24■■□□□ 1.47
PVT1-220ENST00000524165 CDCA8Q53HL2 280 aa24.24■■□□□ 1.47
PVT1-220ENST00000524165 TAOK3Q9H2K8 898 aa24.24■■□□□ 1.47
PVT1-220ENST00000524165 TAF1DQ9H5J8 278 aaPredicted RBP24.24■■□□□ 1.47
PVT1-220ENST00000524165 BCL2L12Q9HB09 334 aa24.24■■□□□ 1.47
PVT1-220ENST00000524165 COL15A1P39059 1388 aa24.24■■□□□ 1.47
PVT1-220ENST00000524165 DEFB115Q30KQ5 88 aa24.23■■□□□ 1.47
PVT1-220ENST00000524165 DNAJC10Q8IXB1 793 aa24.23■■□□□ 1.47
PVT1-220ENST00000524165 COL11A2P13942 1736 aaPredicted RBP24.22■■□□□ 1.47
PVT1-220ENST00000524165 C1orf141Q5JVX7 400 aa24.22■■□□□ 1.47
PVT1-220ENST00000524165 ZNF622Q969S3 477 aaKnown RBP eCLIP24.22■■□□□ 1.47
PVT1-220ENST00000524165 ADAMTSL1Q8N6G6 1762 aa24.21■■□□□ 1.47
PVT1-220ENST00000524165 CYP19A1P11511 503 aaPredicted RBP24.21■■□□□ 1.47
PVT1-220ENST00000524165 WDR33Q9C0J8 1336 aaKnown RBP24.2■■□□□ 1.46
PVT1-220ENST00000524165 PDE6BP35913 854 aa24.2■■□□□ 1.46
PVT1-220ENST00000524165 ZNF219Q9P2Y4 722 aaPredicted RBP24.2■■□□□ 1.46
PVT1-220ENST00000524165 ARFGEF2Q9Y6D5 1785 aa24.19■■□□□ 1.46
PVT1-220ENST00000524165 BRIP1Q9BX63 1249 aa24.19■■□□□ 1.46
PVT1-220ENST00000524165 THSD7BQ9C0I4 1608 aa24.19■■□□□ 1.46
PVT1-220ENST00000524165 CACNA1SQ13698 1873 aa24.19■■□□□ 1.46
PVT1-220ENST00000524165 SLX4Q8IY92 1834 aa24.18■■□□□ 1.46
PVT1-220ENST00000524165 PDE4DIPQ5VU43 2346 aa24.18■■□□□ 1.46
PVT1-220ENST00000524165 TNRC18O15417 2968 aaPredicted RBP24.16■■□□□ 1.46
PVT1-220ENST00000524165 SOGA3Q5TF21 947 aa24.16■■□□□ 1.46
PVT1-220ENST00000524165 ZBTB1Q9Y2K1 713 aa24.16■■□□□ 1.46
PVT1-220ENST00000524165 EAPPQ56P03 285 aaPredicted RBP24.15■■□□□ 1.46
PVT1-220ENST00000524165 CNKSR1Q969H4 720 aa24.14■■□□□ 1.45
PVT1-220ENST00000524165 BICDL1Q6ZP65 573 aa24.13■■□□□ 1.45
PVT1-220ENST00000524165 PNMA8AQ86V59 439 aaPredicted RBP24.13■■□□□ 1.45
PVT1-220ENST00000524165 CNTROBQ8N137 903 aa24.13■■□□□ 1.45
PVT1-220ENST00000524165 BEGAINQ9BUH8 593 aa24.13■■□□□ 1.45
PVT1-220ENST00000524165 HACL1Q9UJ83 578 aa24.13■■□□□ 1.45
PVT1-220ENST00000524165 CLEC11AQ9Y240 323 aa24.13■■□□□ 1.45
PVT1-220ENST00000524165 ABT1Q9ULW3 272 aaKnown RBP24.12■■□□□ 1.45
PVT1-220ENST00000524165 EPHX2P34913 555 aa24.11■■□□□ 1.45
PVT1-220ENST00000524165 STYK1Q6J9G0 422 aa24.11■■□□□ 1.45
PVT1-220ENST00000524165 PRR5LQ6MZQ0 368 aa24.11■■□□□ 1.45
PVT1-220ENST00000524165 SLC52A2Q9HAB3 445 aa24.11■■□□□ 1.45
PVT1-220ENST00000524165 PRPF40BQ6NWY9 871 aaKnown RBP24.1■■□□□ 1.45
PVT1-220ENST00000524165 SCN7AQ01118 1682 aa24.1■■□□□ 1.45
PVT1-220ENST00000524165 MRC1P22897 1456 aa24.09■■□□□ 1.45
PVT1-220ENST00000524165 TBC1D9BQ66K14 1250 aa24.09■■□□□ 1.45
PVT1-220ENST00000524165 VSIG10Q8N0Z9 540 aa24.09■■□□□ 1.45
PVT1-220ENST00000524165 A0A087WZG4 1122 aa24.08■■□□□ 1.45
PVT1-220ENST00000524165 ECE1P42892 770 aa24.08■■□□□ 1.45
PVT1-220ENST00000524165 TNNT2P45379 298 aaPredicted RBP24.08■■□□□ 1.45
PVT1-220ENST00000524165 MAP1SQ66K74 1059 aaPredicted RBP24.08■■□□□ 1.45
PVT1-220ENST00000524165 SRGNP10124 158 aa24.07■■□□□ 1.44
PVT1-220ENST00000524165 EIF5P55010 431 aaKnown RBP24.07■■□□□ 1.44
PVT1-220ENST00000524165 AEBP1Q8IUX7 1158 aa24.07■■□□□ 1.44
PVT1-220ENST00000524165 ZNF541Q9H0D2 1346 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms