RNA–Protein interactions for RNA: ENST00000519361.5

PTK2-211, Transcript of protein tyrosine kinase 2, human

TSL 5

Gene PTK2, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-211	ENST00000519361	C1orf216	Q8TAB5	229 aa		9.22	□□□□□ -0.93
PTK2-211	ENST00000519361	NOVA2	Q9UNW9	492 aa	Known RBP	9.22	□□□□□ -0.93
PTK2-211	ENST00000519361	USP3	Q9Y6I4	520 aa		9.22	□□□□□ -0.93
PTK2-211	ENST00000519361	RIPOR1	Q6ZS17	1223 aa		9.21	□□□□□ -0.94
PTK2-211	ENST00000519361	GAS2L2	Q8NHY3	880 aa		9.21	□□□□□ -0.94
PTK2-211	ENST00000519361	HINFP	Q9BQA5	517 aa		9.21	□□□□□ -0.94
PTK2-211	ENST00000519361	ERBB4	Q15303	1308 aa		9.21	□□□□□ -0.94
PTK2-211	ENST00000519361	PPP1R15A	O75807	674 aa	Predicted RBP	9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	MSX1	P28360	303 aa		9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	PSMA6	P60900	246 aa	Known RBP	9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	NBPF1	Q3BBV0	1214 aa		9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	VWA5B2	Q8N398	1253 aa		9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	ZDHHC3	Q9NYG2	299 aa		9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	CHMP3	Q9Y3E7	222 aa		9.2	□□□□□ -0.94
PTK2-211	ENST00000519361	CDC14C	A4D256	554 aa		9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	CSB-PGBD3	P0DP91	1061 aa		9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	NOS2	P35228	1153 aa		9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	LBR	Q14739	615 aa	Known RBP	9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	PGBD3	Q8N328	593 aa		9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	L3MBTL2	Q969R5	705 aa		9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	AIDA	Q96BJ3	306 aa		9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.19	□□□□□ -0.94
PTK2-211	ENST00000519361	SERTM1	A2A2V5	107 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	DBN1	Q16643	649 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	TBCEL	Q5QJ74	424 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	LCE2C	Q5TA81	110 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	FOXR1	Q6PIV2	292 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	ATAD2	Q6PL18	1390 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	STAG2	Q8N3U4	1231 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	GPAM	Q9HCL2	828 aa		9.18	□□□□□ -0.94
PTK2-211	ENST00000519361	TAT	P17735	454 aa	Predicted RBP	9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	SWI5	Q1ZZU3	235 aa		9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	POTEA	Q6S8J7	498 aa		9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	ZDHHC1	Q8WTX9	485 aa		9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	ZNF837	Q96EG3	531 aa	Predicted RBP	9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	NUCKS1	Q9H1E3	243 aa	Known RBP	9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	CRISPLD1	Q9H336	500 aa		9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	ZMIZ1	Q9ULJ6	1067 aa		9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	ZNF232	Q9UNY5	417 aa		9.17	□□□□□ -0.94
PTK2-211	ENST00000519361	ACIN1	Q9UKV3	1341 aa	Known RBP	9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	WIPF1	O43516	503 aa		9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	C21orf2	O43822	256 aa		9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	PPP1R12B	O60237	982 aa	Predicted RBP	9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	GMPR	P36959	345 aa		9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	HIRA	P54198	1017 aa	Predicted RBP	9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	EFHC2	Q5JST6	749 aa		9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	SCG3	Q8WXD2	468 aa	Known RBP	9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	PARP3	Q9Y6F1	533 aa		9.16	□□□□□ -0.94
PTK2-211	ENST00000519361	EML1	O00423	815 aa		9.15	□□□□□ -0.94
PTK2-211	ENST00000519361	ATP4A	P20648	1035 aa		9.15	□□□□□ -0.94
PTK2-211	ENST00000519361	IGFBP4	P22692	258 aa		9.15	□□□□□ -0.94
PTK2-211	ENST00000519361	GPR161	Q8N6U8	529 aa	Known RBP	9.15	□□□□□ -0.94
PTK2-211	ENST00000519361	RUBCNL	Q9H714	662 aa		9.15	□□□□□ -0.94
PTK2-211	ENST00000519361	GPC6	Q9Y625	555 aa	Predicted RBP	9.14	□□□□□ -0.95
PTK2-211	ENST00000519361	WEE1	P30291	646 aa		9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	TXLNA	P40222	546 aa		9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	ARSJ	Q5FYB0	599 aa	Predicted RBP	9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	C1orf53	Q5VUE5	145 aa		9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	NLRP8	Q86W28	1048 aa		9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	STK32A	Q8WU08	396 aa		9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	GTPBP3	Q969Y2	492 aa	Known RBP	9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	TRERF1	Q96PN7	1200 aa		9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	C2orf49	Q9BVC5	232 aa	Predicted RBP	9.13	□□□□□ -0.95
PTK2-211	ENST00000519361	FAM69C	Q0P6D2	419 aa		9.12	□□□□□ -0.95
PTK2-211	ENST00000519361	TMEM164	Q5U3C3	297 aa		9.12	□□□□□ -0.95
PTK2-211	ENST00000519361	CHMP7	Q8WUX9	453 aa	Predicted RBP	9.12	□□□□□ -0.95
PTK2-211	ENST00000519361	ZIC5	Q96T25	663 aa		9.12	□□□□□ -0.95
PTK2-211	ENST00000519361		A0A1W2PNR3	127 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	FOXO3	O43524	673 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	LGR5	O75473	907 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	THBS1	P07996	1170 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	SH3PXD2A	Q5TCZ1	1133 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	FIGNL1	Q6PIW4	674 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	BICDL1	Q6ZP65	573 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	CFHR5	Q9BXR6	569 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	COL25A1	Q9BXS0	654 aa	Predicted RBP	9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	PHF24	Q9UPV7	400 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	HCN4	Q9Y3Q4	1203 aa		9.11	□□□□□ -0.95
PTK2-211	ENST00000519361	UBAP2L	Q14157	1087 aa	Known RBP	9.09	□□□□□ -0.95
PTK2-211	ENST00000519361	C7orf43	Q8WVR3	580 aa		9.09	□□□□□ -0.95
PTK2-211	ENST00000519361	PHACTR1	Q9C0D0	580 aa		9.09	□□□□□ -0.95
PTK2-211	ENST00000519361	GJA3	Q9Y6H8	435 aa		9.09	□□□□□ -0.95
PTK2-211	ENST00000519361	GPR25	O00155	361 aa		9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	INSM1	Q01101	510 aa	Predicted RBP	9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	ALDH16A1	Q8IZ83	802 aa		9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	RHPN1	Q8TCX5	695 aa		9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	CLP1	Q92989	425 aa	Known RBP	9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	CNTNAP3B	Q96NU0	1288 aa		9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	CNTNAP3	Q9BZ76	1288 aa		9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	ZCCHC2	Q9C0B9	1178 aa	Known RBP	9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	NEUROD4	Q9HD90	331 aa		9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.08	□□□□□ -0.96	3e-10	■■■■■ 57.7
PTK2-211	ENST00000519361	PCDHGC4	Q9Y5F7	938 aa		9.08	□□□□□ -0.96
PTK2-211	ENST00000519361	KRT76	Q01546	638 aa		9.07	□□□□□ -0.96
PTK2-211	ENST00000519361	GAS6	Q14393	721 aa		9.07	□□□□□ -0.96
PTK2-211	ENST00000519361	RNFT1	Q5M7Z0	435 aa		9.07	□□□□□ -0.96
PTK2-211	ENST00000519361	VTI1A	Q96AJ9	217 aa		9.07	□□□□□ -0.96
PTK2-211	ENST00000519361	ANKIB1	Q9P2G1	1089 aa		9.07	□□□□□ -0.96
PTK2-211	ENST00000519361	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	9.07	□□□□□ -0.96

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