RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 HMGB1P1B2RPK0 211 aaPredicted RBP5.85□□□□□ -1.47
MATR3-219ENST00000512040 TRAK2O60296 914 aa5.85□□□□□ -1.47
MATR3-219ENST00000512040 BRD1O95696 1058 aa5.85□□□□□ -1.47
MATR3-219ENST00000512040 FAM50AQ14320 339 aaKnown RBP5.85□□□□□ -1.47
MATR3-219ENST00000512040 SH3D19Q5HYK7 790 aa5.85□□□□□ -1.47
MATR3-219ENST00000512040 MYSM1Q5VVJ2 828 aa5.85□□□□□ -1.47
MATR3-219ENST00000512040 THSD4Q6ZMP0 1018 aa5.85□□□□□ -1.47
MATR3-219ENST00000512040 PROSER2Q86WR7 435 aaPredicted RBP5.85□□□□□ -1.47
MATR3-219ENST00000512040 TRIM52Q96A61 297 aa5.85□□□□□ -1.47
MATR3-219ENST00000512040 SLAIN2Q9P270 581 aa5.85□□□□□ -1.47
MATR3-219ENST00000512040 TSR3Q9UJK0 312 aaKnown RBP5.85□□□□□ -1.47
MATR3-219ENST00000512040 COL22A1Q8NFW1 1626 aaPredicted RBP5.85□□□□□ -1.47
MATR3-219ENST00000512040 NEXMIFQ5QGS0 1516 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 ANKRD50Q9ULJ7 1429 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 NDUFV2P19404 249 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 MCCD1P59942 119 aaPredicted RBP5.84□□□□□ -1.47
MATR3-219ENST00000512040 FAM193AP78312 1265 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 OS9Q13438 667 aaPredicted RBP5.84□□□□□ -1.47
MATR3-219ENST00000512040 DIXDC1Q155Q3 683 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 KMT5BQ4FZB7 885 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 GORABQ5T7V8 394 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 BRINP3Q76B58 766 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 DDX17Q92841 729 aaKnown RBP5.84□□□□□ -1.47
MATR3-219ENST00000512040 SGSM3Q96HU1 749 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 PCMTD1Q96MG8 357 aaPredicted RBP5.84□□□□□ -1.47
MATR3-219ENST00000512040 WBP1LQ9NX94 342 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 CHIC2Q9UKJ5 165 aa5.84□□□□□ -1.47
MATR3-219ENST00000512040 SETD5Q9C0A6 1442 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 BRWD3Q6RI45 1802 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 PNPLA6Q8IY17 1366 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 MOXD2PA6NHM9 499 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 HOXA2O43364 376 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 TPD52L2O43399 206 aaKnown RBP5.83□□□□□ -1.48
MATR3-219ENST00000512040 SMARCA5O60264 1052 aaPredicted RBP5.83□□□□□ -1.48
MATR3-219ENST00000512040 CLK2P49760 499 aaKnown RBP5.83□□□□□ -1.48
MATR3-219ENST00000512040 APLP1P51693 650 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 FUT2Q10981 343 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 IRF5Q13568 498 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 SKIV2LQ15477 1246 aaKnown RBP5.83□□□□□ -1.48
MATR3-219ENST00000512040 NUTM2DQ5VT03 806 aaPredicted RBP5.83□□□□□ -1.48
MATR3-219ENST00000512040 RIC3Q7Z5B4 369 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 PROCA1Q8NCQ7 364 aaPredicted RBP5.83□□□□□ -1.48
MATR3-219ENST00000512040 HLA-CQ95604 372 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 ZNF622Q969S3 477 aaKnown RBP eCLIP5.83□□□□□ -1.485e-22■□□□□ 9
MATR3-219ENST00000512040 LIMD1Q9UGP4 676 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 EID1Q9Y6B2 187 aa5.83□□□□□ -1.48
MATR3-219ENST00000512040 ABCA3Q99758 1704 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 AFF2P51816 1311 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 SPATA31A6Q5VVP1 1343 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 GLI3P10071 1580 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 MMP14P50281 582 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 USP46P62068 366 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 GUCA2AQ02747 115 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 CSPP1Q1MSJ5 1256 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 RSBN1LQ6PCB5 846 aaPredicted RBP5.82□□□□□ -1.48
MATR3-219ENST00000512040 NME8Q8N427 588 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 RETREG2Q8NC44 543 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 GOPCQ9HD26 462 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 PPME1Q9Y570 386 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 DCCP43146 1447 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 NCOA3Q9Y6Q9 1424 aa5.82□□□□□ -1.48
MATR3-219ENST00000512040 METP08581 1390 aa5.81□□□□□ -1.48
MATR3-219ENST00000512040 MARCH6O60337 910 aa5.81□□□□□ -1.48
MATR3-219ENST00000512040 PUS10Q3MIT2 529 aaKnown RBP5.81□□□□□ -1.48
MATR3-219ENST00000512040 UBA5Q9GZZ9 404 aa5.81□□□□□ -1.48
MATR3-219ENST00000512040 TERF2IPQ9NYB0 399 aa5.81□□□□□ -1.48
MATR3-219ENST00000512040 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.81□□□□□ -1.48
MATR3-219ENST00000512040 ADGRL3Q9HAR2 1447 aa5.81□□□□□ -1.48
MATR3-219ENST00000512040 MYOM2P54296 1465 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 SPTLC1O15269 473 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 ACTN4O43707 911 aaKnown RBP5.8□□□□□ -1.48
MATR3-219ENST00000512040 FDX1P10109 184 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 ATP6V1AP38606 617 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 TSHZ1Q6ZSZ6 1077 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 PRR14Q9BWN1 585 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 SLC52A1Q9NWF4 448 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 SERPINA10Q9UK55 444 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 SUGT1Q9Y2Z0 365 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 PCDHB15Q9Y5E8 787 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 RRBP1Q9P2E9 1410 aaKnown RBP5.8□□□□□ -1.48
MATR3-219ENST00000512040 PIK3R4Q99570 1358 aa5.8□□□□□ -1.48
MATR3-219ENST00000512040 IFT172Q9UG01 1749 aa5.79□□□□□ -1.48
MATR3-219ENST00000512040 NUTM2BA6NNL0 878 aaPredicted RBP5.79□□□□□ -1.48
MATR3-219ENST00000512040 NUTM2EB1AL46 878 aaPredicted RBP5.79□□□□□ -1.48
MATR3-219ENST00000512040 INSM1Q01101 510 aaPredicted RBP5.79□□□□□ -1.48
MATR3-219ENST00000512040 RALBP1Q15311 655 aa5.79□□□□□ -1.48
MATR3-219ENST00000512040 NUTM2AQ8IVF1 878 aaPredicted RBP5.79□□□□□ -1.48
MATR3-219ENST00000512040 TBX22Q9Y458 520 aa5.79□□□□□ -1.48
MATR3-219ENST00000512040 PCDHB3Q9Y5E6 796 aa5.79□□□□□ -1.48
MATR3-219ENST00000512040 PPLO60437 1756 aa5.79□□□□□ -1.48
MATR3-219ENST00000512040 PLCH1Q4KWH8 1693 aa5.79□□□□□ -1.48
MATR3-219ENST00000512040 C1orf167Q5SNV9 1468 aa5.78□□□□□ -1.48
MATR3-219ENST00000512040 PXDNQ92626 1479 aa5.78□□□□□ -1.48
MATR3-219ENST00000512040 LRP5O75197 1615 aa5.78□□□□□ -1.48
MATR3-219ENST00000512040 ANKRD62A6NC57 917 aa5.78□□□□□ -1.48
MATR3-219ENST00000512040 ATRNO75882 1429 aa5.78□□□□□ -1.48
MATR3-219ENST00000512040 RXRBP28702 533 aa5.78□□□□□ -1.48
MATR3-219ENST00000512040 MYBPC2Q14324 1141 aa5.78□□□□□ -1.48
MATR3-219ENST00000512040 MORN1Q5T089 497 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms