RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 AKAP4Q5JQC9 854 aa14.1□□□□□ -0.15
CDCA7-208ENST00000496441 IBTKQ9P2D0 1353 aaPredicted RBP14.1□□□□□ -0.15
CDCA7-208ENST00000496441 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
CDCA7-208ENST00000496441 CHMLP26374 656 aa14.09□□□□□ -0.15
CDCA7-208ENST00000496441 RHPN1Q8TCX5 695 aa14.09□□□□□ -0.15
CDCA7-208ENST00000496441 CIZ1Q9ULV3 898 aaPredicted RBP14.09□□□□□ -0.15
CDCA7-208ENST00000496441 ARHGEF25Q86VW2 580 aa14.09□□□□□ -0.15
CDCA7-208ENST00000496441 GAS2L3Q86XJ1 694 aa14.09□□□□□ -0.15
CDCA7-208ENST00000496441 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.15
CDCA7-208ENST00000496441 BEND3Q5T5X7 828 aa14.08□□□□□ -0.15
CDCA7-208ENST00000496441 SIL1Q9H173 461 aa14.08□□□□□ -0.15
CDCA7-208ENST00000496441 PXDNQ92626 1479 aa14.08□□□□□ -0.16
CDCA7-208ENST00000496441 GOLGA6L22H0YM25 854 aa14.08□□□□□ -0.16
CDCA7-208ENST00000496441 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
CDCA7-208ENST00000496441 OSBPL3Q9H4L5 887 aa14.08□□□□□ -0.16
CDCA7-208ENST00000496441 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
CDCA7-208ENST00000496441 SPG7Q9UQ90 795 aa14.08□□□□□ -0.16
CDCA7-208ENST00000496441 CEMIPQ8WUJ3 1361 aa14.07□□□□□ -0.16
CDCA7-208ENST00000496441 FAM208AQ9UK61 1670 aaKnown RBP14.07□□□□□ -0.16
CDCA7-208ENST00000496441 SSH3Q8TE77 659 aa14.07□□□□□ -0.16
CDCA7-208ENST00000496441 DBF4Q9UBU7 674 aaPredicted RBP14.07□□□□□ -0.16
CDCA7-208ENST00000496441 ADGRL3Q9HAR2 1447 aa14.06□□□□□ -0.16
CDCA7-208ENST00000496441 CHD2O14647 1828 aaKnown RBP14.06□□□□□ -0.16
CDCA7-208ENST00000496441 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
CDCA7-208ENST00000496441 KLHDC4Q8TBB5 520 aa14.06□□□□□ -0.16
CDCA7-208ENST00000496441 GRPEL1Q9HAV7 217 aa14.06□□□□□ -0.16
CDCA7-208ENST00000496441 SALL3Q9BXA9 1300 aa14.06□□□□□ -0.16
CDCA7-208ENST00000496441 PRPF40AO75400 957 aaKnown RBP14.06□□□□□ -0.16
CDCA7-208ENST00000496441 GIGYF1O75420 1035 aaPredicted RBP14.06□□□□□ -0.16
CDCA7-208ENST00000496441 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
CDCA7-208ENST00000496441 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
CDCA7-208ENST00000496441 CAVIN1Q6NZI2 390 aaKnown RBP14.05□□□□□ -0.16
CDCA7-208ENST00000496441 RAPGEF4Q8WZA2 1011 aa14.05□□□□□ -0.16
CDCA7-208ENST00000496441 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
CDCA7-208ENST00000496441 ADCY9O60503 1353 aa14.05□□□□□ -0.16
CDCA7-208ENST00000496441 CPA1P15085 419 aa14.05□□□□□ -0.16
CDCA7-208ENST00000496441 MCCP23508 829 aa14.05□□□□□ -0.16
CDCA7-208ENST00000496441 FSD2A1L4K1 749 aa14.04□□□□□ -0.16
CDCA7-208ENST00000496441 AMOTQ4VCS5 1084 aa14.04□□□□□ -0.16
CDCA7-208ENST00000496441 NPHP4O75161 1426 aaPredicted RBP14.04□□□□□ -0.16
CDCA7-208ENST00000496441 KIF1BPQ96EK5 621 aa14.04□□□□□ -0.16
CDCA7-208ENST00000496441 NFAT5O94916 1531 aa14.04□□□□□ -0.16
CDCA7-208ENST00000496441 RIC3Q7Z5B4 369 aa14.04□□□□□ -0.16
CDCA7-208ENST00000496441 ATF3P18847 181 aa14.03□□□□□ -0.16
CDCA7-208ENST00000496441 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
CDCA7-208ENST00000496441 NUCB2P80303 420 aa14.03□□□□□ -0.16
CDCA7-208ENST00000496441 CCDC8Q9H0W5 538 aaPredicted RBP14.03□□□□□ -0.16
CDCA7-208ENST00000496441 RRAGDQ9NQL2 400 aaPredicted RBP14.03□□□□□ -0.16
CDCA7-208ENST00000496441 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
CDCA7-208ENST00000496441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.03□□□□□ -0.16
CDCA7-208ENST00000496441 LRRC37A3O60309 1634 aa14.03□□□□□ -0.16
CDCA7-208ENST00000496441 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.16
CDCA7-208ENST00000496441 ZDHHC9Q9Y397 364 aa14.02□□□□□ -0.16
CDCA7-208ENST00000496441 MRE11P49959 708 aa14.02□□□□□ -0.17
CDCA7-208ENST00000496441 HSPA2P54652 639 aa14.02□□□□□ -0.17
CDCA7-208ENST00000496441 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.17
CDCA7-208ENST00000496441 POLA2Q14181 598 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 AACSQ86V21 672 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 CLASRPQ8N2M8 674 aaKnown RBP14.01□□□□□ -0.17
CDCA7-208ENST00000496441 GDPD2Q9HCC8 539 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 IFIT2P09913 472 aaKnown RBP14.01□□□□□ -0.17
CDCA7-208ENST00000496441 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 BICC1Q9H694 974 aaKnown RBP14.01□□□□□ -0.17
CDCA7-208ENST00000496441 STAP2Q9UGK3 403 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 CACNA1FO60840 1977 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 ERBB3P21860 1342 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
CDCA7-208ENST00000496441 RAB11FIP3O75154 756 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 SKOR2Q2VWA4 1001 aaPredicted RBP14□□□□□ -0.17
CDCA7-208ENST00000496441 KIAA1211Q6ZU35 1233 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 CNTROBQ8N137 903 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 C19orf44Q9H6X5 657 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 DIAPH3Q9NSV4 1193 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 RGPD5Q99666 1765 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 ATP5J2-PTCD1G3V325 749 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 PTCD1O75127 700 aaKnown RBP14□□□□□ -0.17
CDCA7-208ENST00000496441 ZNF790Q6PG37 636 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 COPS6Q7L5N1 327 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 USP16Q9Y5T5 823 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 NDUFB9Q9Y6M9 179 aa14□□□□□ -0.17
CDCA7-208ENST00000496441 RASEFQ8IZ41 740 aa13.99□□□□□ -0.17
CDCA7-208ENST00000496441 XAGE3Q8WTP9 111 aa13.99□□□□□ -0.17
CDCA7-208ENST00000496441 ZNF496Q96IT1 587 aaPredicted RBP13.99□□□□□ -0.17
CDCA7-208ENST00000496441 MYD88Q99836 296 aa13.99□□□□□ -0.17
CDCA7-208ENST00000496441 TLR7Q9NYK1 1049 aaKnown RBP13.99□□□□□ -0.17
CDCA7-208ENST00000496441 NSFL1CQ9UNZ2 370 aaKnown RBP13.99□□□□□ -0.17
CDCA7-208ENST00000496441 GRM8O00222 908 aa13.98□□□□□ -0.17
CDCA7-208ENST00000496441 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
CDCA7-208ENST00000496441 BOLA2Q9H3K6 86 aa13.98□□□□□ -0.17
CDCA7-208ENST00000496441 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
CDCA7-208ENST00000496441 LMBRD1Q9NUN5 540 aa13.98□□□□□ -0.17
CDCA7-208ENST00000496441 HOXB7P09629 217 aa13.97□□□□□ -0.17
CDCA7-208ENST00000496441 KCNJ4P48050 445 aa13.97□□□□□ -0.17
CDCA7-208ENST00000496441 TTC5Q8N0Z6 440 aa13.97□□□□□ -0.17
CDCA7-208ENST00000496441 ZNF330Q9Y3S2 320 aaPredicted RBP13.97□□□□□ -0.17
CDCA7-208ENST00000496441 G3BP1Q13283 466 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDCA7-208ENST00000496441 FAM43AQ8N2R8 423 aa13.97□□□□□ -0.17
CDCA7-208ENST00000496441 EDC3Q96F86 508 aaKnown RBP13.97□□□□□ -0.17
CDCA7-208ENST00000496441 HYPKQ9NX55 129 aa13.97□□□□□ -0.17
CDCA7-208ENST00000496441 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms