RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PHF24Q9UPV7 400 aa8.33□□□□□ -1.08
HMGN1-218ENST00000490032 CELA2BP08218 269 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-218ENST00000490032 TEAD4Q15561 434 aa8.32□□□□□ -1.08
HMGN1-218ENST00000490032 NBPF1Q3BBV0 1214 aa8.32□□□□□ -1.08
HMGN1-218ENST00000490032 NLRP8Q86W28 1048 aa8.32□□□□□ -1.08
HMGN1-218ENST00000490032 AIDAQ96BJ3 306 aa8.32□□□□□ -1.08
HMGN1-218ENST00000490032 PPP1R12CQ9BZL4 782 aa8.32□□□□□ -1.08
HMGN1-218ENST00000490032 ATXN7L1Q9ULK2 861 aaPredicted RBP8.32□□□□□ -1.08
HMGN1-218ENST00000490032 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
HMGN1-218ENST00000490032 TNS4Q8IZW8 715 aa8.31□□□□□ -1.08
HMGN1-218ENST00000490032 ZDHHC1Q8WTX9 485 aa8.31□□□□□ -1.08
HMGN1-218ENST00000490032 BNIP3LO60238 219 aa8.3□□□□□ -1.08
HMGN1-218ENST00000490032 MAP2K3P46734 347 aa8.3□□□□□ -1.08
HMGN1-218ENST00000490032 FIGNL1Q6PIW4 674 aa8.3□□□□□ -1.08
HMGN1-218ENST00000490032 SLC9A9Q8IVB4 645 aa8.3□□□□□ -1.08
HMGN1-218ENST00000490032 ACDQ96AP0 544 aa8.3□□□□□ -1.08
HMGN1-218ENST00000490032 LRRC4BQ9NT99 713 aa8.3□□□□□ -1.08
HMGN1-218ENST00000490032 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
HMGN1-218ENST00000490032 TATP17735 454 aaPredicted RBP8.29□□□□□ -1.08
HMGN1-218ENST00000490032 KCNMA1Q12791 1236 aa8.29□□□□□ -1.08
HMGN1-218ENST00000490032 POTEAQ6S8J7 498 aa8.29□□□□□ -1.08
HMGN1-218ENST00000490032 L3MBTL2Q969R5 705 aa8.29□□□□□ -1.08
HMGN1-218ENST00000490032 ZIC5Q96T25 663 aa8.29□□□□□ -1.08
HMGN1-218ENST00000490032 ZCCHC2Q9C0B9 1178 aaKnown RBP8.29□□□□□ -1.08
HMGN1-218ENST00000490032 BCRP11274 1271 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 RASA1P20936 1047 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 NOS2P35228 1153 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 GSK3AP49840 483 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 MAP3K10Q02779 954 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 KANK4Q5T7N3 995 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-218ENST00000490032 ABHD17AQ96GS6 310 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 ZNF594Q96JF6 807 aaPredicted RBP8.28□□□□□ -1.08
HMGN1-218ENST00000490032 PCDHGC4Q9Y5F7 938 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 PARP3Q9Y6F1 533 aa8.28□□□□□ -1.08
HMGN1-218ENST00000490032 EML1O00423 815 aa8.27□□□□□ -1.09
HMGN1-218ENST00000490032 FGFR3P22607 806 aa8.27□□□□□ -1.09
HMGN1-218ENST00000490032 TXLNAP40222 546 aa8.27□□□□□ -1.09
HMGN1-218ENST00000490032 ARSJQ5FYB0 599 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-218ENST00000490032 TBCELQ5QJ74 424 aa8.27□□□□□ -1.09
HMGN1-218ENST00000490032 SERTM1A2A2V5 107 aa8.26□□□□□ -1.09
HMGN1-218ENST00000490032 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
HMGN1-218ENST00000490032 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-218ENST00000490032 HIRAP54198 1017 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-218ENST00000490032 PSMA6P60900 246 aaKnown RBP8.26□□□□□ -1.09
HMGN1-218ENST00000490032 PTK7Q13308 1070 aa8.26□□□□□ -1.09
HMGN1-218ENST00000490032 SAMD5Q5TGI4 173 aa8.26□□□□□ -1.09
HMGN1-218ENST00000490032 C7orf43Q8WVR3 580 aa8.26□□□□□ -1.09
HMGN1-218ENST00000490032 KLRG1Q96E93 195 aa8.26□□□□□ -1.09
HMGN1-218ENST00000490032 OXCT2Q9BYC2 517 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-218ENST00000490032 TSPAN10Q9H1Z9 355 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-218ENST00000490032 ENAMQ9NRM1 1142 aa8.26□□□□□ -1.09
HMGN1-218ENST00000490032 ZNF777Q9ULD5 760 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-218ENST00000490032 GPC6Q9Y625 555 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-218ENST00000490032 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
HMGN1-218ENST00000490032 RNF225M0QZC1 329 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-218ENST00000490032 C2CD2LO14523 706 aa8.25□□□□□ -1.09
HMGN1-218ENST00000490032 OIP5O43482 229 aa8.25□□□□□ -1.09
HMGN1-218ENST00000490032 SEC13P55735 322 aa8.25□□□□□ -1.09
HMGN1-218ENST00000490032 CTBSQ01459 385 aa8.25□□□□□ -1.09
HMGN1-218ENST00000490032 TNP2Q05952 138 aa8.25□□□□□ -1.09
HMGN1-218ENST00000490032 TSEN2Q8NCE0 465 aaKnown RBP8.25□□□□□ -1.09
HMGN1-218ENST00000490032 HCN2Q9UL51 889 aa8.25□□□□□ -1.09
HMGN1-218ENST00000490032 RBM19Q9Y4C8 960 aaKnown RBP8.25□□□□□ -1.09
HMGN1-218ENST00000490032 FAM157BP0CG42 384 aa8.24□□□□□ -1.09
HMGN1-218ENST00000490032 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-218ENST00000490032 CRTC2Q53ET0 693 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-218ENST00000490032 CFAP70Q5T0N1 1121 aa8.24□□□□□ -1.09
HMGN1-218ENST00000490032 FAM182BQ5T319 152 aa8.24□□□□□ -1.09
HMGN1-218ENST00000490032 SH3PXD2AQ5TCZ1 1133 aa8.24□□□□□ -1.09
HMGN1-218ENST00000490032 LARP1Q6PKG0 1096 aaKnown RBP8.24□□□□□ -1.09
HMGN1-218ENST00000490032 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
HMGN1-218ENST00000490032 VRTNQ9H8Y1 702 aa8.24□□□□□ -1.09
HMGN1-218ENST00000490032 GDF2Q9UK05 429 aaPredicted RBP8.24□□□□□ -1.09
HMGN1-218ENST00000490032 C21orf2O43822 256 aa8.23□□□□□ -1.09
HMGN1-218ENST00000490032 MAPTP10636 758 aaKnown RBP8.23□□□□□ -1.09
HMGN1-218ENST00000490032 BMP4P12644 408 aa8.23□□□□□ -1.09
HMGN1-218ENST00000490032 MARSP56192 900 aaKnown RBP8.23□□□□□ -1.09
HMGN1-218ENST00000490032 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
HMGN1-218ENST00000490032 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
HMGN1-218ENST00000490032 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L21D6R901 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 EFSO43281 561 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 GOLGA6L1Q8N7Z2 621 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 GAS2L2Q8NHY3 880 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 SCARF2Q96GP6 870 aaPredicted RBP8.22□□□□□ -1.09
HMGN1-218ENST00000490032 GJA3Q9Y6H8 435 aa8.22□□□□□ -1.09
HMGN1-218ENST00000490032 DCDC2BA2VCK2 349 aa8.21□□□□□ -1.1
HMGN1-218ENST00000490032 DPYDQ12882 1025 aa8.21□□□□□ -1.1
HMGN1-218ENST00000490032 LAMC2Q13753 1193 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms