RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 GPAMQ9HCL2 828 aa8.99□□□□□ -0.97
RAB4A-204ENST00000489342 CFTRP13569 1480 aa8.98□□□□□ -0.97
RAB4A-204ENST00000489342 CDK2AP1O14519 115 aa8.98□□□□□ -0.97
RAB4A-204ENST00000489342 MTFR1Q15390 333 aa8.98□□□□□ -0.97
RAB4A-204ENST00000489342 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
RAB4A-204ENST00000489342 FOXR1Q6PIV2 292 aa8.98□□□□□ -0.97
RAB4A-204ENST00000489342 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
RAB4A-204ENST00000489342 SIX5Q8N196 739 aa8.98□□□□□ -0.97
RAB4A-204ENST00000489342 NANOS1Q8WY41 292 aaKnown RBP8.98□□□□□ -0.97
RAB4A-204ENST00000489342 SFI1A8K8P3 1242 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L15C9J2P7 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L10C9JJH3 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L13C9JLJ4 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L12C9JPN9 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L11C9JVI0 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L21D6R901 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L18D6R9N7 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L22D6RA61 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L17D6RBQ6 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L19D6RCP7 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L20D6RJB6 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 SEC13P55735 322 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 USP17L24Q0WX57 530 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 NBPF1Q3BBV0 1214 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
RAB4A-204ENST00000489342 LCE2CQ5TA81 110 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 TRIM22Q8IYM9 498 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 GMCL1Q96IK5 515 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 SERPINA10Q9UK55 444 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 CHMP3Q9Y3E7 222 aa8.97□□□□□ -0.97
RAB4A-204ENST00000489342 ARAP1Q96P48 1450 aa8.96□□□□□ -0.97
RAB4A-204ENST00000489342 FAM196BA6NMK8 535 aa8.96□□□□□ -0.98
RAB4A-204ENST00000489342 WIPF1O43516 503 aa8.96□□□□□ -0.98
RAB4A-204ENST00000489342 INSM1Q01101 510 aaPredicted RBP8.96□□□□□ -0.98
RAB4A-204ENST00000489342 CRTC2Q53ET0 693 aaPredicted RBP8.96□□□□□ -0.98
RAB4A-204ENST00000489342 ZNF837Q96EG3 531 aaPredicted RBP8.96□□□□□ -0.98
RAB4A-204ENST00000489342 NUCKS1Q9H1E3 243 aaKnown RBP8.96□□□□□ -0.98
RAB4A-204ENST00000489342 CUEDC1Q9NWM3 386 aaPredicted RBP8.96□□□□□ -0.98
RAB4A-204ENST00000489342 SCHIP1Q9P0W5 487 aaPredicted RBP8.96□□□□□ -0.98
RAB4A-204ENST00000489342 AQRO60306 1485 aaKnown RBP eCLIP8.96□□□□□ -0.98
RAB4A-204ENST00000489342 TATP17735 454 aaPredicted RBP8.95□□□□□ -0.98
RAB4A-204ENST00000489342 MSX1P28360 303 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 DPYDQ12882 1025 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 PTK7Q13308 1070 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 DBN1Q16643 649 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 TBCELQ5QJ74 424 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 SLC9A9Q8IVB4 645 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 TSEN2Q8NCE0 465 aaKnown RBP8.95□□□□□ -0.98
RAB4A-204ENST00000489342 TRERF1Q96PN7 1200 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 HINFPQ9BQA5 517 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 USP3Q9Y6I4 520 aa8.95□□□□□ -0.98
RAB4A-204ENST00000489342 M0R2N6 131 aa8.94□□□□□ -0.98
RAB4A-204ENST00000489342 EFHC2Q5JST6 749 aa8.94□□□□□ -0.98
RAB4A-204ENST00000489342 ANKMY2Q8IV38 441 aa8.94□□□□□ -0.98
RAB4A-204ENST00000489342 GPR161Q8N6U8 529 aaKnown RBP8.94□□□□□ -0.98
RAB4A-204ENST00000489342 COL25A1Q9BXS0 654 aaPredicted RBP8.94□□□□□ -0.98
RAB4A-204ENST00000489342 RUBCNLQ9H714 662 aa8.94□□□□□ -0.98
RAB4A-204ENST00000489342 ZNF232Q9UNY5 417 aa8.94□□□□□ -0.98
RAB4A-204ENST00000489342 IQSEC3Q9UPP2 1182 aaPredicted RBP8.94□□□□□ -0.98
RAB4A-204ENST00000489342 PARP3Q9Y6F1 533 aa8.94□□□□□ -0.98
RAB4A-204ENST00000489342 ARSJQ5FYB0 599 aaPredicted RBP8.93□□□□□ -0.98
RAB4A-204ENST00000489342 GTPBP3Q969Y2 492 aaKnown RBP8.93□□□□□ -0.98
RAB4A-204ENST00000489342 CNTNAP3BQ96NU0 1288 aa8.93□□□□□ -0.98
RAB4A-204ENST00000489342 CNTNAP3Q9BZ76 1288 aa8.93□□□□□ -0.98
RAB4A-204ENST00000489342 IFT140Q96RY7 1462 aa8.93□□□□□ -0.98
RAB4A-204ENST00000489342 GPR25O00155 361 aa8.92□□□□□ -0.98
RAB4A-204ENST00000489342 EPHA4P54764 986 aa8.92□□□□□ -0.98
RAB4A-204ENST00000489342 BICDL1Q6ZP65 573 aa8.92□□□□□ -0.98
RAB4A-204ENST00000489342 C1orf216Q8TAB5 229 aa8.92□□□□□ -0.98
RAB4A-204ENST00000489342 FAM200AQ8TCP9 573 aa8.92□□□□□ -0.98
RAB4A-204ENST00000489342 TSPAN10Q9H1Z9 355 aaPredicted RBP8.92□□□□□ -0.98
RAB4A-204ENST00000489342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.91□□□□□ -0.98
RAB4A-204ENST00000489342 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
RAB4A-204ENST00000489342 NOS2P35228 1153 aa8.91□□□□□ -0.98
RAB4A-204ENST00000489342 PSMA6P60900 246 aaKnown RBP8.91□□□□□ -0.98
RAB4A-204ENST00000489342 FOXK2Q01167 660 aa8.91□□□□□ -0.98
RAB4A-204ENST00000489342 L3MBTL2Q969R5 705 aa8.91□□□□□ -0.98
RAB4A-204ENST00000489342 GJA3Q9Y6H8 435 aa8.91□□□□□ -0.98
RAB4A-204ENST00000489342 CHD1O14646 1710 aa8.91□□□□□ -0.98
RAB4A-204ENST00000489342 PPP1R12BO60237 982 aaPredicted RBP8.9□□□□□ -0.98
RAB4A-204ENST00000489342 DKK1O94907 266 aa8.9□□□□□ -0.98
RAB4A-204ENST00000489342 LBRQ14739 615 aaKnown RBP8.9□□□□□ -0.98
RAB4A-204ENST00000489342 TEAD4Q15561 434 aa8.9□□□□□ -0.98
RAB4A-204ENST00000489342 CHMP7Q8WUX9 453 aaPredicted RBP8.9□□□□□ -0.98
RAB4A-204ENST00000489342 ZDHHC3Q9NYG2 299 aa8.9□□□□□ -0.98
RAB4A-204ENST00000489342 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
RAB4A-204ENST00000489342 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.99
RAB4A-204ENST00000489342 RSF1Q96T23 1441 aaPredicted RBP8.89□□□□□ -0.99
RAB4A-204ENST00000489342 CCDC82Q8N4S0 544 aa8.89□□□□□ -0.99
RAB4A-204ENST00000489342 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
RAB4A-204ENST00000489342 NEUROD4Q9HD90 331 aa8.89□□□□□ -0.99
RAB4A-204ENST00000489342 PHF24Q9UPV7 400 aa8.89□□□□□ -0.99
RAB4A-204ENST00000489342 TOPBP1Q92547 1522 aa8.89□□□□□ -0.99
RAB4A-204ENST00000489342 LGR5O75473 907 aa8.88□□□□□ -0.99
RAB4A-204ENST00000489342 ZDHHC1Q8WTX9 485 aa8.88□□□□□ -0.99
RAB4A-204ENST00000489342 CRISPLD1Q9H336 500 aa8.88□□□□□ -0.99
RAB4A-204ENST00000489342 ATAD2Q6PL18 1390 aa8.87□□□□□ -0.99
RAB4A-204ENST00000489342 TDRD9Q8NDG6 1382 aaKnown RBP8.87□□□□□ -0.99
RAB4A-204ENST00000489342 ATP4AP20648 1035 aa8.87□□□□□ -0.99
RAB4A-204ENST00000489342 TXLNAP40222 546 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms