RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 USP17L19D6RCP7 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L20D6RJB6 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 THBS1P07996 1170 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 ATP4AP20648 1035 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 USP17L24Q0WX57 530 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 PTK7Q13308 1070 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 GAS6Q14393 721 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 NBPF1Q3BBV0 1214 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 SLC9A9Q8IVB4 645 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 CRISPLD1Q9H336 500 aa9.55□□□□□ -0.88
SMARCC1-207ENST00000485833 GPR25O00155 361 aa9.54□□□□□ -0.88
SMARCC1-207ENST00000485833 SEC13P55735 322 aa9.54□□□□□ -0.88
SMARCC1-207ENST00000485833 AIDAQ96BJ3 306 aa9.54□□□□□ -0.88
SMARCC1-207ENST00000485833 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
SMARCC1-207ENST00000485833 ZDHHC3Q9NYG2 299 aa9.54□□□□□ -0.88
SMARCC1-207ENST00000485833 EFHC2Q5JST6 749 aa9.53□□□□□ -0.88
SMARCC1-207ENST00000485833 TSEN2Q8NCE0 465 aaKnown RBP9.53□□□□□ -0.88
SMARCC1-207ENST00000485833 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
SMARCC1-207ENST00000485833 STK17AQ9UEE5 414 aa9.53□□□□□ -0.88
SMARCC1-207ENST00000485833 DPYDQ12882 1025 aa9.52□□□□□ -0.89
SMARCC1-207ENST00000485833 TEAD4Q15561 434 aa9.52□□□□□ -0.89
SMARCC1-207ENST00000485833 TBCELQ5QJ74 424 aa9.52□□□□□ -0.89
SMARCC1-207ENST00000485833 TSPAN10Q9H1Z9 355 aaPredicted RBP9.52□□□□□ -0.89
SMARCC1-207ENST00000485833 TATP17735 454 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 RFX1P22670 979 aa9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 UBAP2LQ14157 1087 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 C14orf37Q86TY3 774 aa9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 L3MBTL2Q969R5 705 aa9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 PARP3Q9Y6F1 533 aa9.51□□□□□ -0.89
SMARCC1-207ENST00000485833 SLURP2P0DP57 97 aa9.5□□□□□ -0.89
SMARCC1-207ENST00000485833 NOS2P35228 1153 aa9.5□□□□□ -0.89
SMARCC1-207ENST00000485833 PSMA6P60900 246 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-207ENST00000485833 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 TXLNAP40222 546 aa9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 NLRP8Q86W28 1048 aa9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 CCDC97Q96F63 343 aaPredicted RBP9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 CFHR5Q9BXR6 569 aa9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 ZNF232Q9UNY5 417 aa9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 CHMP3Q9Y3E7 222 aa9.49□□□□□ -0.89
SMARCC1-207ENST00000485833 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 EML1O00423 815 aa9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 ARSJQ5FYB0 599 aaPredicted RBP9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 FIGNL1Q6PIW4 674 aa9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 ARXQ96QS3 562 aa9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 PHF24Q9UPV7 400 aa9.48□□□□□ -0.89
SMARCC1-207ENST00000485833 A0A1W2PNR3 127 aa9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 ADAMTS2O95450 1211 aa9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 MX2P20592 715 aa9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 SH3PXD2AQ5TCZ1 1133 aa9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 SERPINA10Q9UK55 444 aa9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 ATXN7L1Q9ULK2 861 aaPredicted RBP9.47□□□□□ -0.89
SMARCC1-207ENST00000485833 PPP1R12BO60237 982 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-207ENST00000485833 HIRAP54198 1017 aaPredicted RBP9.46□□□□□ -0.9
SMARCC1-207ENST00000485833 HINFPQ9BQA5 517 aa9.46□□□□□ -0.9
SMARCC1-207ENST00000485833 NDFIP2Q9NV92 336 aa9.46□□□□□ -0.9
SMARCC1-207ENST00000485833 IGF1RP08069 1367 aa9.46□□□□□ -0.9
SMARCC1-207ENST00000485833 C21orf2O43822 256 aa9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 BICDL1Q6ZP65 573 aa9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 GAS2L2Q8NHY3 880 aa9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 SCG3Q8WXD2 468 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 ABHD17AQ96GS6 310 aa9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 ZCCHC2Q9C0B9 1178 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 NSFL1CQ9UNZ2 370 aaKnown RBP9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 GPC6Q9Y625 555 aaPredicted RBP9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 ATAD2Q6PL18 1390 aa9.45□□□□□ -0.9
SMARCC1-207ENST00000485833 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-207ENST00000485833 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
SMARCC1-207ENST00000485833 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
SMARCC1-207ENST00000485833 FAM200AQ8TCP9 573 aa9.44□□□□□ -0.9
SMARCC1-207ENST00000485833 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
SMARCC1-207ENST00000485833 PCDHGC4Q9Y5F7 938 aa9.44□□□□□ -0.9
SMARCC1-207ENST00000485833 GJA3Q9Y6H8 435 aa9.44□□□□□ -0.9
SMARCC1-207ENST00000485833 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
SMARCC1-207ENST00000485833 BNIP3LO60238 219 aa9.43□□□□□ -0.9
SMARCC1-207ENST00000485833 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
SMARCC1-207ENST00000485833 SVOPQ8N4V2 548 aa9.43□□□□□ -0.9
SMARCC1-207ENST00000485833 RHPN1Q8TCX5 695 aa9.43□□□□□ -0.9
SMARCC1-207ENST00000485833 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
SMARCC1-207ENST00000485833 C2orf49Q9BVC5 232 aaPredicted RBP9.43□□□□□ -0.9
SMARCC1-207ENST00000485833 FGFR3P22607 806 aa9.42□□□□□ -0.9
SMARCC1-207ENST00000485833 IGFBP4P22692 258 aa9.42□□□□□ -0.9
SMARCC1-207ENST00000485833 ELOAQ14241 798 aaKnown RBP9.42□□□□□ -0.9
SMARCC1-207ENST00000485833 SAMD5Q5TGI4 173 aa9.42□□□□□ -0.9
SMARCC1-207ENST00000485833 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
SMARCC1-207ENST00000485833 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
SMARCC1-207ENST00000485833 LGR5O75473 907 aa9.41□□□□□ -0.9
SMARCC1-207ENST00000485833 MAP2K3P46734 347 aa9.41□□□□□ -0.9
SMARCC1-207ENST00000485833 CHMP7Q8WUX9 453 aaPredicted RBP9.41□□□□□ -0.9
SMARCC1-207ENST00000485833 C7orf43Q8WVR3 580 aa9.41□□□□□ -0.9
SMARCC1-207ENST00000485833 ZMIZ1Q9ULJ6 1067 aa9.41□□□□□ -0.9
SMARCC1-207ENST00000485833 HCN4Q9Y3Q4 1203 aa9.41□□□□□ -0.9
SMARCC1-207ENST00000485833 DCDC2BA2VCK2 349 aa9.4□□□□□ -0.9
SMARCC1-207ENST00000485833 ATG7O95352 703 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms