RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 DDX21Q9NR30 783 aaKnown RBP eCLIP23.2■■□□□ 1.31
NECTIN3-206ENST00000485303 SOS1Q07889 1333 aaPredicted RBP23.2■■□□□ 1.3
NECTIN3-206ENST00000485303 JARID2Q92833 1246 aaPredicted RBP23.2■■□□□ 1.3
NECTIN3-206ENST00000485303 HMMRO75330 724 aa23.19■■□□□ 1.3
NECTIN3-206ENST00000485303 PIGBQ92521 554 aa23.19■■□□□ 1.3
NECTIN3-206ENST00000485303 UNC5CLQ8IV45 518 aa23.19■■□□□ 1.3
NECTIN3-206ENST00000485303 MYD88Q99836 296 aa23.18■■□□□ 1.3
NECTIN3-206ENST00000485303 HDAC1Q13547 482 aaPredicted RBP23.18■■□□□ 1.3
NECTIN3-206ENST00000485303 OS9Q13438 667 aaPredicted RBP23.17■■□□□ 1.3
NECTIN3-206ENST00000485303 SPATA31A1Q5TZJ5 1347 aa23.17■■□□□ 1.3
NECTIN3-206ENST00000485303 ATP5J2-PTCD1G3V325 749 aa23.17■■□□□ 1.3
NECTIN3-206ENST00000485303 ZBTB3Q9H5J0 574 aa23.17■■□□□ 1.3
NECTIN3-206ENST00000485303 AHDC1Q5TGY3 1603 aaPredicted RBP23.17■■□□□ 1.3
NECTIN3-206ENST00000485303 KSR2Q6VAB6 950 aa23.16■■□□□ 1.3
NECTIN3-206ENST00000485303 DNAJC10Q8IXB1 793 aa23.16■■□□□ 1.3
NECTIN3-206ENST00000485303 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
NECTIN3-206ENST00000485303 LMO7Q8WWI1 1683 aa23.16■■□□□ 1.3
NECTIN3-206ENST00000485303 SMARCA5O60264 1052 aaPredicted RBP23.14■■□□□ 1.3
NECTIN3-206ENST00000485303 CEP85Q6P2H3 762 aa23.14■■□□□ 1.3
NECTIN3-206ENST00000485303 ANKRD13DQ6ZTN6 518 aa23.14■■□□□ 1.29
NECTIN3-206ENST00000485303 SIRT2Q8IXJ6 389 aa23.14■■□□□ 1.29
NECTIN3-206ENST00000485303 NBPF7P0C2Y1 421 aaPredicted RBP23.13■■□□□ 1.29
NECTIN3-206ENST00000485303 ANP32AP39687 249 aaKnown RBP23.13■■□□□ 1.29
NECTIN3-206ENST00000485303 RPAP2Q8IXW5 612 aaPredicted RBP23.13■■□□□ 1.29
NECTIN3-206ENST00000485303 CHMP3Q9Y3E7 222 aa23.13■■□□□ 1.29
NECTIN3-206ENST00000485303 CHD1LQ86WJ1 897 aa23.13■■□□□ 1.29
NECTIN3-206ENST00000485303 FAM208AQ9UK61 1670 aaKnown RBP23.12■■□□□ 1.29
NECTIN3-206ENST00000485303 CDCA7Q9BWT1 371 aaPredicted RBP23.12■■□□□ 1.29
NECTIN3-206ENST00000485303 ANKRD44Q8N8A2 993 aa23.12■■□□□ 1.29
NECTIN3-206ENST00000485303 GCC1Q96CN9 775 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 USP44Q9H0E7 712 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 RGS12O14924 1447 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 SPATA31A5Q5VU36 1347 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 SPATA31A7Q8IWB4 1347 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 ABCC6O95255 1503 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 FAM161AQ3B820 660 aa23.11■■□□□ 1.29
NECTIN3-206ENST00000485303 SRGAP3O43295 1099 aa23.1■■□□□ 1.29
NECTIN3-206ENST00000485303 HEG1Q9ULI3 1381 aa23.1■■□□□ 1.29
NECTIN3-206ENST00000485303 STARD3NLO95772 234 aa23.1■■□□□ 1.29
NECTIN3-206ENST00000485303 NKX1-1Q15270 411 aaPredicted RBP23.1■■□□□ 1.29
NECTIN3-206ENST00000485303 SMC5Q8IY18 1101 aa23.1■■□□□ 1.29
NECTIN3-206ENST00000485303 MARCH10Q8NA82 808 aaPredicted RBP23.09■■□□□ 1.29
NECTIN3-206ENST00000485303 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
NECTIN3-206ENST00000485303 SURF6O75683 361 aaKnown RBP23.09■■□□□ 1.29
NECTIN3-206ENST00000485303 BEND3Q5T5X7 828 aa23.09■■□□□ 1.29
NECTIN3-206ENST00000485303 TTLL7Q6ZT98 887 aa23.09■■□□□ 1.29
NECTIN3-206ENST00000485303 LRRC37A3O60309 1634 aa23.08■■□□□ 1.29
NECTIN3-206ENST00000485303 COL16A1Q07092 1604 aaPredicted RBP23.08■■□□□ 1.29
NECTIN3-206ENST00000485303 ABCA3Q99758 1704 aa23.08■■□□□ 1.28
NECTIN3-206ENST00000485303 AFF2P51816 1311 aa23.08■■□□□ 1.28
NECTIN3-206ENST00000485303 PNMA6EA0A0J9YXQ4 647 aa23.07■■□□□ 1.28
NECTIN3-206ENST00000485303 KCNQ2O43526 872 aa23.07■■□□□ 1.28
NECTIN3-206ENST00000485303 BACH2Q9BYV9 841 aa23.07■■□□□ 1.28
NECTIN3-206ENST00000485303 THRAP3Q9Y2W1 955 aaKnown RBP23.07■■□□□ 1.28
NECTIN3-206ENST00000485303 PDIA6Q15084 440 aa23.07■■□□□ 1.28
NECTIN3-206ENST00000485303 KCNQ4P56696 695 aa23.06■■□□□ 1.28
NECTIN3-206ENST00000485303 PPP1R42Q7Z4L9 355 aa23.06■■□□□ 1.28
NECTIN3-206ENST00000485303 ADCY9O60503 1353 aa23.06■■□□□ 1.28
NECTIN3-206ENST00000485303 COL14A1Q05707 1796 aaKnown RBP23.06■■□□□ 1.28
NECTIN3-206ENST00000485303 FAM177BA6PVY3 158 aa23.06■■□□□ 1.28
NECTIN3-206ENST00000485303 C16orf71Q8IYS4 520 aaPredicted RBP23.05■■□□□ 1.28
NECTIN3-206ENST00000485303 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
NECTIN3-206ENST00000485303 ATP6V1AP38606 617 aa23.05■■□□□ 1.28
NECTIN3-206ENST00000485303 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
NECTIN3-206ENST00000485303 IL1RAPL2Q9NP60 686 aa23.05■■□□□ 1.28
NECTIN3-206ENST00000485303 NUCB1Q02818 461 aa23.05■■□□□ 1.28
NECTIN3-206ENST00000485303 NBPF26B4DH59 902 aa23.04■■□□□ 1.28
NECTIN3-206ENST00000485303 NBPF14Q5TI25 921 aa23.04■■□□□ 1.28
NECTIN3-206ENST00000485303 NBPF10Q6P3W6 841 aaKnown RBP23.04■■□□□ 1.28
NECTIN3-206ENST00000485303 UBE3BQ7Z3V4 1068 aa23.04■■□□□ 1.28
NECTIN3-206ENST00000485303 NBPF15Q8N660 670 aa23.04■■□□□ 1.28
NECTIN3-206ENST00000485303 KIF6Q6ZMV9 814 aa23.04■■□□□ 1.28
NECTIN3-206ENST00000485303 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
NECTIN3-206ENST00000485303 SIL1Q9H173 461 aa23.03■■□□□ 1.28
NECTIN3-206ENST00000485303 A0A087WZG4 1122 aa23.03■■□□□ 1.28
NECTIN3-206ENST00000485303 GPTP24298 496 aa23.03■■□□□ 1.28
NECTIN3-206ENST00000485303 GRM8O00222 908 aa23.03■■□□□ 1.28
NECTIN3-206ENST00000485303 VPS72Q15906 364 aa23.02■■□□□ 1.28
NECTIN3-206ENST00000485303 DCTPP1Q9H773 170 aa23.02■■□□□ 1.28
NECTIN3-206ENST00000485303 UPF2Q9HAU5 1272 aaKnown RBP23.02■■□□□ 1.28
NECTIN3-206ENST00000485303 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
NECTIN3-206ENST00000485303 PARP4Q9UKK3 1724 aaKnown RBP23.01■■□□□ 1.27
NECTIN3-206ENST00000485303 CCDC85AQ96PX6 553 aaPredicted RBP23.01■■□□□ 1.27
NECTIN3-206ENST00000485303 METTL22Q9BUU2 404 aaPredicted RBP23.01■■□□□ 1.27
NECTIN3-206ENST00000485303 TEX13AQ9BXU3 409 aaPredicted RBP23.01■■□□□ 1.27
NECTIN3-206ENST00000485303 ALDH1L1O75891 902 aa23■■□□□ 1.27
NECTIN3-206ENST00000485303 ATP8B2P98198 1209 aa23■■□□□ 1.27
NECTIN3-206ENST00000485303 TSHZ3Q63HK5 1081 aa23■■□□□ 1.27
NECTIN3-206ENST00000485303 OTUD7AQ8TE49 926 aaPredicted RBP23■■□□□ 1.27
NECTIN3-206ENST00000485303 MFAP1P55081 439 aaKnown RBP23■■□□□ 1.27
NECTIN3-206ENST00000485303 QTRT2Q9H974 415 aaKnown RBP23■■□□□ 1.27
NECTIN3-206ENST00000485303 HDAC5Q9UQL6 1122 aa23■■□□□ 1.27
NECTIN3-206ENST00000485303 DAXXQ9UER7 740 aaPredicted RBP22.99■■□□□ 1.27
NECTIN3-206ENST00000485303 PA2G4Q9UQ80 394 aaKnown RBP22.99■■□□□ 1.27
NECTIN3-206ENST00000485303 ZBTB1Q9Y2K1 713 aa22.99■■□□□ 1.27
NECTIN3-206ENST00000485303 IGKV5-2P06315 115 aa22.98■■□□□ 1.27
NECTIN3-206ENST00000485303 PLBD2Q8NHP8 589 aa22.98■■□□□ 1.27
NECTIN3-206ENST00000485303 NEURL1BA8MQ27 555 aa22.97■■□□□ 1.27
NECTIN3-206ENST00000485303 SUCLG2Q96I99 432 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms